| Id Trinity | TRINITY_DN47112_c1_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_310421 |
| Sequence | CTTTATTCTTGGTTCCTGGTTTGTATTTGATCTCAAAATCATATCCAAGTAACTTTGCCATCTATTTATGTTGACCCTCATTGATAATGTTCTGTTCAAT CAAATATCTAAGGCTTTTTTTATCAGAATGTACCTTAAAATGCCTCCCTAGAAGGTAGTGGTGCCATTTTTTTACTGCAAAGACAATGACCATCAATTCC TTCTGATATAGAGATTTCCGCTATGCAATTTCTGATAGTGCTTCGCTCATGTATGCTAGGGGCTTTCCACCTTGCATGAGAACACCTCCTATGCCACTTC CTGATGTCTCAGTTTCGATCACAAACTCTTTTTCAAAATCCGGAATAGCCAAAATAGAAATCTTAGTCATGGCTTCCTTCAAATTGTCAAAAAATATGTG CCTAATAAAAATGACACTGAACTGATTTTCATACTTCATCTTTTTTGCATATGTTTTAGGTGGATGATTTTCAGTCCCTATTAGAGAATGACAGTGTGGA GGTCGAAGAGACAGTGAAGAGTTATACTGATGAACTATCTGGAAAGCTACTGTATATGGAGCAGCAACTGGAATCACTTCTTGATGCTGTAGTGTCCAAT TGTAGGCCCATGACCCTTGTTGAGAAGCAGCAGCTTCAGAGATTAATTCAGAAGCTACCAGCAGAAAATCTTGACCGTGTCGTGCAGATAATTTGTCGAA GTAGGCCGGTGAAAGAACAAAAAACAGATAAAATATTTGTTGATCTGGAAAAAGAGGATAATGCTACACTCTGGAGACTGTATTACTATATTGAAGCTTT TGAGAAAGCCAAAATACTCTCTAGATGTGGCTGTGGCTGTGGCCTCCATAGTGTTCTCCATCTTCCACACCTTATTCGCCATTAACTCCGAAAATAGCAG AACATCATCGGTCATGTTCCCTGGAGCCGTCACCGGAATTTGTAAGATATGGCTTTCTATGGCCAACCCAGATATGCTTTATTTTCTGTTAAGATTTGTT GGTGTCTTGAATTTCTATCATTGCATACATGATTTATCTTGCAAGCACATGAAGAAAGTAATAACTCACTCAACACTACTTACTATAAACAGTCTCTTCA TGCTTCTGGATTCAATGTTGGCATTGACACACTTTAATTCCCAAAATATTCAATTCTATAAGAAATTTGGCTACCAAAATAATAGAAGGAAATCTGCACA TTAATTTCAACTTCAAGAGTGAAAAATTACATCAGCATATATTTACTAATATTCTTTCATATATCTGCTGGGAATGGGTTTGTCACATTACGTTGTTTGA ACATTGATTATGTTAAGGTAGTTTTGAATTTGATTCACTGTTGATAGAATTAGCTCCACATACCTGTGGATATTCCCGATTTTGATATAATTACTAGTAT GAGGATACATGTGAAAAACAAAAAAATAGCAACTACCAAAGAGTTTGAAGATTTCAAATCACTTTCTACGCTATTATTACTATCAATTATTAATTTCATG GTTATATGTATTGAATGATGTCATAAGGTTCTCTCTTAAATTATATTCAGAAGACATTTATCTCTAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_149848; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310421
| Blastp | Transcription factor GTE5, chloroplastic from Arabidopsis with 40.85% of identity |
|---|---|
| Blastx | Retrovirus-related Pol polyprotein from transposon 17.6 from Sophophora with 41.09% of identity |
| Eggnog | bromodomain(COG5076) |
| Kegg | Link to kegg annotations (AT1G17790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019438698.1) |
| Pfam | Bromodomain extra-terminal - transcription regulation (PF17035.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |