Ll_transcript_311490

• Id Trinity: TRINITY_DN47115_c3_g1_i9
• Name Transcript: Ll_transcript_311490
• Sequence: CTCCTCCCCCTCCTCCTCCTCCTCCGCCACCACCTCCTCTGTCATCTCCTACTGAGAGGGTGATTGTTGAACCGACGACATTCCGCAGAGGGACTAATGT TAGCCCAGCACGAAAAAGTTCAGTTCCTCTTCCCACTTTTGCAAAATATTTCACCATTGCATCTCTTCAACAGTACACAAATAGTTTTTCTCAAGAAAAT CTAATAGGAGGAGGTATGCTGGGCAGCGTGTATAGGGCAGAGCTTCCGGATGGGAAGCTACTTGCTGTGAAGAAACTGGACAAGAGAACTACTGATCACC AGAAAGATGATGACTTTCTTGAATTGGTAAATAATATAGACAGAATACGTCATGTAAATATTGTTAAGCTTGTTGGATACTGTTCGGAGCATGGTCAAAG ACTTTTGATCTATGAGTACTGCGAAAATGGGTCTCTGCATGATGCAATCCATTCAGATGATGCATTTAAAACAAAACTTTCATGGAATACTCGCATCCGG ATAGCACTCGGCGCAGCTAGAGCCTTAGAGTAAGTCAAACAACCATCGCTTTTGCTTGTCCAAAACAAATTAAACCATTGTCTTTTTAAGGAAAAGATTT CTCAACCTTCTTGATTTGTAGCTTATATAATGAGTTCGAAGGTGTTAGTTTTCAAATTGTAGTTTGTATTGCCTGAGTGTTTTAATTTTCCTGTGAATTC ATTTAATGCAAGAAGTATTTTGCTAAAGATATGGTCATTAAATTGCTAGAACTTTCTGAAGTTGAAATTTCTAGAACTTCACACTTGCCCATAATACTTC TTGATGTGGATCTCATAGTGCAAATCACAGTTTGCTCCAATCTCTGTATGAAAGGGGCTGTATATAGTGTAATGCCATTTCAAGAACCAATTCAACTCAA AGGCTTTGGCCGTTTTGTGCTGGCCCAAGAATAGTTTTCAAGACAAATAAATGAAGCTTACGCAAAATAATTGGAAATTGAGAGATGTGAAATTCTTTCT TTGCTTTTAACATATTTAAATACACAAAATTTGAGGCTGAATCTAATACTTGTTGTCATATAACAAGGTATTTGCATGAGCAATGTCAGCCACCCGTGGT ACACAGAAATTTGAAGTCTGCCAATATTCTCCTTGATGACGATCTATCTGTGCGTGTATCTGATTGTGGGTTGGCTCCATTGATAGCTTCAGGGTCTGTA AGTCAGCTCTCGGGGCAACTGCTAACCGCTTATGGCTATGGAGCTCCAGAATTTGAGTCAGGAATTTACACATACCAGAGTGATGTGTACAGCTTTGGAG TGGTTATGCTAGAACTTTTGACTGGCCGTCAGTCACATGACAGGACGCGTCCTCGAGGGGAGCAATTTCTTGTCAGATGGGCAGTACCCCAGCTTCATGA TATTGAGGCCTTATCAAGCATGGTCGATCCTTCTTTAAACGGACGGTACCCTGCCAAATCATTGTCAAACTTTGCCGACATTATTTCTCGATGCCTTCAG GTAGTCTCAGGCTTAAATATCAATGTTTTAGCTCAGTTATCTCCCATCTCATGTAACTAACTTCTTGCCTTAAATGTGACTATGCAGCCCGAGCCGGAAT TTCGGCCAGCAATGTCAGAGGTTGTCCTATACTTACTAAATATGATAAGGAGGGAGTCTCAGCAAAGTGAATGAAATGAAAGAATGAGAATGGTTGTGAT GCTTCAACTAGTAGAGATGTTTATATATGTCATCTGAGGAGGGCCTAATTTGGTGTCTCCAATGCTTTCATCACTTCCTCCTAACCTATTCAACATTCAC ATGCCAAAGTAGTTTTGTCCAGTCAGTTTATGAAAATTGTAATCATCAACACTCCCTGCATGTGTAGTAACATTTATATGTATGATAATTTCTTAGTTCA TTAAAGATTGAACCATGTCATGTTAGTGTTGTTCACAGGTGTGCTAACCAACCCATTTGTTTGATATTTGTTTCCAAATTCCTGATAATGAAATGTAATT CCATTGTGCATCTTTGGTTTCATATGCTTCCTTCATAATGAAATTTTGGTAGCCATTGTACCAAATCACATTCAAGCATTGTAATATAAAGTTACATATT TTTCTG
• Tissue: pods
• Gene name: LI_gene_149880;
• Additional information: details;

Expression of Ll_transcript_311490

FPKM

• PAB: 0.1
• PNAB: 0.4
• PS1: 0.1
• PS2: 0
• PS3: 0.3
• PW1: 0.1
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_311490

• Blastp: Protein STRUBBELIG-RECEPTOR FAMILY 3 from Arabidopsis with 70.34% of identity
• Blastx: Protein STRUBBELIG-RECEPTOR FAMILY 3 from Arabidopsis with 70.15% of identity
• Eggnog: Serine Threonine protein kinase(COG0515)
• Kegg: Link to kegg annotations (AT4G03390)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412912.1)
• Pfam: Protein kinase domain (PF00069.24)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;