Ll_transcript_308846

• Id Trinity: TRINITY_DN47119_c4_g2_i1
• Name Transcript: Ll_transcript_308846
• Sequence: AGCGAAAGAAGCGAAATCTCCTAGAAAGCGAGTCTCTCTCTCTCTCTCACACAGTCAGCGAAAACAAAAAACAAAAAAATCAGTTTGAACACGAAAGTCT AAATCCTTGTTTTGAATTTCAACTAAGAAAACGACAACGACGATGTTTCAGGGTTGCACCACCATGCTAACAAGGTGGCCGTCTCAGCCGAGTCGGTGGA CTCACAACCAGGACAAGCTATTCGAGCGAGCTCTCTTGGTCGTGCCGGAAGACGCGCCGAACCGGTGGGAGAAAATTGCCGAGCAGGTTCCCGGTAAGTC GGCGGCGGAGGTGAAGGTGCACTATGATGATTTGGTTCATGATTTGTTTGAGATCGAATCGGGTCGGGTTTCGGTGCCGGAGTACACGGATGAAACGGCG GTGGCGGCTGGTGGAAGTGGAAGGTTGTCGTCGTGGGACTCTTCGAATCAGATATCGTTTGGGTCAAAACCTAAACATGGCGATAACGAGAAGAAAAAAG GAACTCCATGGACAGAAGAAGAACACAGGTGTTTGAATTTGTGTTTTTATTTTTAGTTTTTATTCTTTGGCTTTTTTATTTTCATCAATTGAAATCAATT TTGGGTTTATGTTTGATGTTGTTTTGTTTTTCCAAAAAAAAAAAATAGATTTTTTATTTTAGAGTTTAGCTCCTTAATGAAATTCTTTTAAGCATCTGGT GAAATTGTGTGCTTATTTTGTTTCTGAGAATCTGCTTTATCTGACAATTTGAATTAGCTGCCACTCCTACATGGAAAAAGGGTTTTTTTATTTTTAAAAG AGATTATCCATCACCCCTCCATAAAGAATTGAATTAATAATTGCTCCCAAGAATCGTACTTTTGATATAGACCAACATCTCCGAAGGGTTTGACAGAATA CCATTTCTCTTCAATTGAGTAACTTTGTTGGTCTTTAAATTTCAGTTATCTTTAATTCAATAATTATGTCTCTTAAGTTTAGGTGTTTCGAGGTGAAATA GGCTGAGGCCTAAGTTTGTTGTAACTTGTAAATTTGTTTAATTATGAGAAATCTTATCTTTGCTCCAAATTAAAATGTATTTTCTTTGTTGTTAGCCAAT AAAGGACTCAAAATTTTGGTATAGAGAATGAAATATGTGCATCGTGTCATGCATTTGAAGATGTGATTGAGTCACTTGACCTTCAGTCTTGCGAATTCTC AGTGAATTCAGTTAAGAGGAATCTTGCATATTTATTATATCTCTATATGATTAATTTTTCTTCATCTATAGTACACGGTTCTAAAAGGTCCACATCATAG TTAAGAATATGACATTCTAATTGAAAGGCACATTGGTGCAATCTCTTTGTCCATTGACAAATAACTGTTGTCCCAAATTCTGTATTGCACCAATTGGAAA CATGTCATGTCAATTAAGAAATTTAATAGTTTGAGAGAGGAATCTTTGTTCAGTTCGCTTACATTCTCATATATCCTTCATAGGCACAACCAATCAAATA TTGACTGTGTCATACATTCAAAATATTTAATTATTCGCCTAATAGACACAATTTTTAATCTCATTGCCAAAATGCTAAATTTCATGTTCCTGCTTACATT ATGTTCTTTTGTGGCAGGCTGTTTCTTGTTGGTCTAAGTAAATTTGGCAAGGGAGATTGGAGAAGCATTTCGAGAAATGTCGTTGTAACAAGAACACCAA CCCAAGTTGCTAGCCATGCCCAGAAATACTTCATTCGTCAAACTGCGGCGAAGAAAGAGAGGAAAAGATCAAGCATCCATGACATAACCACAGTAGACAC TAACTCTGTGTCTGCACCAATGGATCAGAATTGGGTTCCTCCTCCTGGTGCTCCAATGCAGCAGTCACAAGAAATGCAGTATAACCCTATAAACAATTTG CATGATCAAATGGGTGGGTTTGGGTATTCAAACTATGGCTTTTGAAATGTGACAAAAAATGCCAAGATATGCATGTCATGATGTATATAATGCTTTAAGT TTCATTCATCTGTTCCTATTTGTAAAGATTATGGTTATGCTAGCTCATTTAGTGAGTAGGAGTATTGCTAATTGAATTTGTCAGTGTAGATTTAGTTTGA AGTACTAGGTGAATCACAAAACAACAAATAGGGAACTACTGGGAAGGAATTCTCAACAGCAATGAAAATTATTTGTTTTTGTTCTGTCCAATTTGACTAC TGTTTTATAATTTGAGTTTGGGCCAGTGGCTCAATTGTAATATAATTGTACACACCAACGATCAAGCACTACCTTTTTTTGGGTTCCAGCA
• Tissue: pods
• Gene name: LI_gene_149902;
• Additional information: details;

Expression of Ll_transcript_308846

FPKM

• PAB: 3.7
• PNAB: 1.3
• PS1: 4.1
• PS2: 1
• PS3: 1.5
• PW1: 2.8
• PW2: 4.3
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_308846

• Blastp: Transcription factor SRM1 from Arabidopsis with 75% of identity
• Blastx: Transcription factor SRM1 from Arabidopsis with 75% of identity
• Eggnog: Transcription factor(COG5269)
• Kegg: Link to kegg annotations (AT5G08520)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019451314.1)
• Pfam: Myb-like DNA-binding domain (PF00249.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;