| Id Trinity | TRINITY_DN47128_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_309306 |
| Sequence | GATTGGTCCAGCGCAACGAATGGAAGGAAGGGTATGATTTGTGCTGAATAGTTGCGAAATAAAGGGTGGTATAGTAATTTTAACTACAGAAGAAGGAAAG AAACATAAAAATCCACAAAAGGGTTGAAAAATCAGTGATGGATTACGCTGAGAGAGAGAAAAGAAACACAACCCTCGCGGCGGCATAGTAATGGTGACTC CTTTGATTCATGCTACGAATCTCATACATCAATATTCCCTCTCTTTTTTCTCTATTCATTAGATTTTGCTTTTGATTACTATTACTTTATCTTTATTGCA CCGATCTCACATTCTGCATCTCAGATCTATGCTTTAATTCAGTGACGCGAGGTGAAGTCACTGGAAGCAGCGGTTTATCGATCTCTTCCTGAATTTGATT AACACAAACCATGAATCGATCGATAAACCTCTGCATCCAGCGCTCACTTTCCCTCCCTTTCTAAACTCTTCAAAACCATTATTATTATGTTTCATCCGTA TTTTTTAGTGAGGTTCAATGAAATATTCAATGATCCAGTTTGTGATTATGTTATTCTCACAAAATATAGACTCAATAATATTAAATTGTCTATTGCTGCT GTAATCTTAGGAAATGTTATTTTTACCTATATTTTCTTCTATGTTTTTTGATTATGTATCCTTTCAGTATTCTTTTTTTTTCATTACCAGGCCAACAGAT TGAATTTCTGCTCTCGCAACAGTTGAAAGGACTTTCCGTGGAAATTGGTAAAACACTTTATAGCAGATTGAAGAATGTTTTTGAATAACGGGTGGAGAAA ACGATCGATCAGGTTCAGGAAGTGGGTTCCAGTTTTTTGGACAGTTCACAGCGTGCTTTTGAAGCTATAGGGAGTGCTTTGAAACCAGCAATTGAAACAG TGTTGCCGTTTGTGCAGCAAGCTGGGGAAGAGGCCTTGAAAGTTGCTTCACCGGTCATATCAGAGGTTGCAAAGAAGGCACAAGAAGCACTCCAAAGCTC CGGTGTTGATGCTCAACCAGTTCTTAAGACAGTGGCAGATGCTGCAGAACAAACGACCAAGGTGATTGAAGTTGCCAAACCAATAGCTTCAACAACTGTT GAGACCTTGTCTTCTTCAGATCCTACTGTGATTGCTGGAACGGCTGGAGCACTTTTTATTGCATACCTTCTGTTTCCTCCAATCTGGTCTGCAATCTCCT TTAATTTCCGTGGTTACAAAGGTGATCTTACCGCTGCTCAAACCCTTGATCTAATATCTACCCAAAACTACATTTTGCTTGATATTAGGTCAGAGAAGGA TAAGGACAAGACCGGTATCCCCCGCCTTCCCTCTAGTGCTAAAAACAAGTTGATTTCTATTCCTTTGGAAGAACTGCCAAGTAAGCTGAAAGGAGTGGTG AGGAATGTGAAGAACGTAGAAGCTGAAATAGCAGCTTTGAAGATTTCATATCTCAAGAAAATCAACAAAGGCACCAACATTGTGATCTTGGATTCGTACT CGGACTCGGCTAAAATAGTTGCAAGAACACTAACCGGCCTTGGTTTTAAGAACAGCTGGATTATTGCTGATGGGTTTTCTGGGGGCAGAGGATGGATAAA TAGTAGGTTAGGAACAGATTCATATAAATTTTCTTTTGCAGAAGTGCTGTCACCATCCAGAGTCATTCCTGCTGCTGTTAGAAATTTTGGTACCACAAGC CAATCTAGTAGGAAACTTCTACCTGGGTCTGACTGAATCTTTTTCTGCATTCTAATGAGTCATTTTTATTGATTAAATTGATCATGTGATAGCCCATACC AAATCCTCTCTTTTCATCTGCTTGTTCACTTTCAACTCTTCACCTTTATCAATGGATTGTTCCTGGTTTATTATCATTCCCAATCACTACAAATCTATGG ACATGGTTGAAATAATAATATCCACAACGGGAAGACATGTTTTGAGTTATTAGAGTAGTCACCTTAATAGTACTGCATATTGAGCAAGAGCAACTACTGT GACTAAGTGTGAATAACACATCATATTTATCATTTGGTCAATCAATACAAAAGACAATTTTTAATCAAAATTTTTAAACATATTAATTACTCTTATACTT ATGAATTAGCTTTGGCAGTGTAGTTGTAAATTTATCAAAGGTTGTTGTAGTTTGAAGTTGCAAATGTATTCAAAGATGATTAATTTAAAAACATTTTTAT TGTTGGAAATGGATTATACTCAATGCAATGTTACGAAATCAAATTTAGTTGATAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150012; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309306
| Blastp | - |
|---|---|
| Blastx | Calcium sensing receptor, chloroplastic from Arabidopsis with 70.66% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | gma-MIR162a (MI0007208) |
| Ncbi protein | Link to NCBI protein (XP_019463659.1) |
| Pfam | - |
| Rfam | MIR162_2 (RF00742) |
| GO | - |