Id Trinity | TRINITY_DN47135_c0_g2_i16 |
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Name Transcript | Ll_transcript_309466 |
Sequence | ATCAGTTTCTGCAAAAAAACTATTTATGTTTTCTCTTTCATTTTGAGAGTGAGAGACAGAAACGGGGGTTTGACTTTTCCATTCTCCTCCCTTTCAATCA ATCAGCTCCGACACATCGCACTTCAGGACGTCTCTAGACGGAGCATCATGAGTGTAGACCTAAAGAAAACTGCCTCTAATGGCAATGAGAATTTGTCAAT ATCACAAGAACAGCAGGCACAGATCACTGAGGTGCGAAGGTTGATAGGGCCATTGTCTGGTAAGGCGTCTACATATTGTTCTGATGCATCCATTGCAAGG TATTTAAGGGCACGAAATTGGCATGTCAAGAAGGCAGCTAAAATGTTGAAACAATCCTTAAAATGGAGAGCAGAGTACAAACCAGAGGAGATCCGCTGGG TGAGTGACTACTTGTCTTCACTTGTTCTTATGACTTTTGAGACGGAATGCATTGCTGAGATGTATCCAGTATCTTTGTCGCTATTAAAAAAGAGCGACCA GAGCATGATGCTCTCACTTAGTGTGGTTTGGGGAGGGTAGATGTGCACAGTCTTACCCTACAAGCGGAGAGACTATTTCCAGTTATCCACTTAGTGTCCG TGAAAAGGAGAGTTGTTTGGCATCTCCCCTGCCAGGGACGGCCTTCGGGCTTTCCTGTTACACACTTGTTGCTATTGCTGAGTGTAATTTAAGATCTTTT TATGTAACTAGGTTAAGGTGGTTGAGCTGAGTATTTGCTCTGTGTCTTTTCCTTTGTCTACACTTATCTCTTAAGTGTAGTTGAGGGTACTAGGTAGGCT GGAGCAAACATAAAGAGTGCTCCATGGTATCCACTAGCCCTGTTTTGTCTACTCCCCCATCCCATTTTAATTGTCACATTAACATTTGAAGTTTTTTCAT ATTGTTTGTCACCTTAAGAAATCAAGGTGTATTAACTACTTTTTGTCTCCTGTTAGGGATAGTTCAGTAAAAATACATTATTTTACATAGGTAATCAACA CATTCAATAATTACCTTAGTTTGTGCGCGTTAGGCTGAAGTGACAATGAAAGTGAGACAGAGAGGGAGTATTATATTGATCTTAAGAGTTAAGAGCGATT AAGTGAATTTAGTTGAGACAGATAATTCCTTATTAACTGCTTCCCCCGGATGGTTTGATGCACATTTTTTGTTGATATAGGAAGATGTTGCTCTTGAAGC AGAGACAGGGAAGATCTATAGATCAAATTATACTGACAAGCATGGGAGAACGGTTCTTGTAATGAGACCTAGCCGCCAGAACACGAAGTCAACGAAAGGA CAGATTAAGTATTTGGTATACTGCATGGAGAATGCTGTTTTAAATCTTCAAACACAACAAGAACAAATGGTGTGGCTGATTGACTTCCAGGGTTTTAATT TGTCACATATATCAGTCAAGATGACGCGTGAGACTGCCCATGTATTACAAGACCATTATCCAGAACGGCTGGGTCTGGCAATACTGTACAATCCCCCTAA GTTCTTCGAACCATTCTTCACGATGGTGAAGCCCCTATTAGAGCCTAAGACTTTTAATAAAGTGAAGTTTGCTTACTCCGATGATCAAAACACCAAGAAA ATCATAGAGGATTTGTTTGATATGGACCTTCTTGAATCTGCATTCGGTGGGAATGATGACACAGGTTTTGATATAAGTAAATATGCTGAGAGAATGAAAG AGGATGACAAGAAGAGTTCCTCTTACTGGACCGGAGAAAACTCTCCATCACCAGTCTCAAACATCGTTCCTTCTTTAGATTCGATTAGCTTAGATGCTGA CTCTGAGTCTGACAATGAGAAAGTAATCTCTTCCCCTGATTCTGAGACGGAGAAAGAGATCATCAACCCCAACCACCACATCGTGGTTAATCATGGTGCT AGTAATGCTAGTGCAGGTATGCAATAGAATGAGAGATTACATACCTCAGCGCCTTTTTTTGAGGAGAGCTCAGGCAAGTGTTTGTGACATTATTCTAGTT TGAATTTTAGAATCAGGATACTTTTTCAGAACTTCATGTTGGATTTATGGTGGCAAATAATTTCACTTGTTTGTGGATGGAAGCTTGTGTACCCTTGAAT ACATTGTACAGGCATGGAATGCTTGCTTGTGCTTCTTGAGTATTTTGCTTCTCTTATGTTGACATTATACTTGCTCCTTCATGGAGATTGCTTAGTTATT ATTTATTCATCTATTGGATGATGCTCCATCTTCCTCACATGTATAAGGTTTCTTAGGCTATGACATCCAGGGAAATGATTGAATGATTTAAAAAAATATA ATTTTGAAAAATGACTCACTGGATGAAGATTGAACACGGGTTAAATTCTGGATTATTTTTATTCCAATTTTATGAAGAAATAAATCTAAGCTGTTT BLAST |
Tissue | pods |
Gene name | LI_gene_150065; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309466
Blastp | CRAL-TRIO domain-containing protein C23B6.04c from Schizosaccharomyces with 36.36% of identity |
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Blastx | CRAL-TRIO domain-containing protein C23B6.04c from Schizosaccharomyces with 36.48% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (SPCC23B6.04c) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019461934.1) |
Pfam | CRAL/TRIO domain (PF00650.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |