Ll_transcript_310319

• Id Trinity: TRINITY_DN47139_c0_g1_i1
• Name Transcript: Ll_transcript_310319
• Sequence: TTCTAATCAATAAATATCTATTGACTACTGTTGCTAAGAAATAAATTAAAGGCTATTTGTAGTGGGTTTGAACTTTCAAGAACTGAAAAACAATTCCTTC TCTTCTCATATTTCTCATCTCAAATTTATCAATGGTTTCCTTAACCCACTTATGTTTATTTTTCATCATTCTTCTCCATCTTCACACCATCATCACATGT GAAGAGATTTGTGAAACCATGTCATGTGGTGAAATTGATATTGAATTTCCTTTCAGTTTAAAAGGGGCCAATGGTAGTTGTAACAACCCAGACCCAAGTT TCCAACTTTCATGCGACAACAATAGTCGTACGATTCTGACACTCCCAAATTCTGGGGATTTGTTAGTTAAAAGGATCAATTATGAGAAACAAGTGATTCA AGTCAACGACCCAAATGGGTGTCTCCCCAAACGTTACTTACAAAACTTCACCTTTTCCATTTCCCTTCCTTTCATCTTTGATGTCACTGTTTATGATTTC TACGACCTTGTTTTCGTAAAGTGCCCTTCCAATCTATCTGACTCAATTTCACTTCCTTCAATTTCTTGTCTTCGAGAAACAAACGCTTCTTCTTCTTCTT CTTCGTATTATTATTCATTTTTTCGACATTATGTGAATGTGTCTGATTCATCATCAGTATTCTATGGGTGTGAGGTGATTTCTTCTAGTGTTGCTGTCCC CCTTCCAACTATGATGACGTGGCCAAATCTGAACCGTGATATTGAGTTGATATGGGACATACCCATTTGTGAGGATTGTGCTGCTCGTTCTCAACTTTGT GGCTTCGTTAATACTTCAACTTTTCAAGTCGGATGCATCTTTGACCCTAACCACACCACAGGTGTTTCAAAAAGTCTCAAATATGGTTTAAGCATTGGAT TGGGAATACCTGCACTCTTATGTATGATCGGGCTTTCTTGCTTTATTTACAAGAAATTCAAGATTCACCACGGGCCCAACACAGAGCTTCCCAGTAATAT CTCTGTTTTCAATCTTCAGCTACAGCCTGGTAATTTAACGGCAGGCCTGGATGGGCCTGAAATCGAGAAGTTTCCGAAGACTCTTATTGGTGAAAGTGGG CGCTTACCAAAGCCCAACAATAATATATGCCCAATATGCCTATGTGACTATGAGCCGAAGGAGATGTTAAGGACAATACCTGAGTGCAACCATTATTTTC ATGCATCATGTATAGATGAGTGGCTTAAGATGAATGCTACATGCCCCTTATGTAGGAATTCACCAGATGCAGCATCCTCTAATGTTGCATCCTCTTCCTC TTCTTCTTCTTCACGTACCATAGATAATCCAAGTCCAAATCACACATTTCATACAACTTAGACGACTATTTTGAGTATTTTCACTATTTTGCCATCTGTA GTATACAATTTTCTCCCTTCCAAATACAAGAAGGACTTTACTATATGTTTTTTTGTAAAAGTATCAATGTAAAGTGGCTCTTTTGCATGTAAAAATAAGG AGGAGCAAAACACAGAAAATGAGAAATGTCATAATTTTCATCATACCCATATCTTCGAC
• Tissue: pods
• Gene name: LI_gene_150104;
• Additional information: details;

Expression of Ll_transcript_310319

FPKM

• PAB: 1.8
• PNAB: 0.4
• PS1: 0.8
• PS2: 0.2
• PS3: 0.9
• PW1: 0.9
• PW2: 3.3
• PW3: 4.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_310319

• Blastp: Putative RING-H2 finger protein ATL21A from Arabidopsis with 32.89% of identity
• Blastx: Putative RING-H2 finger protein ATL21A from Arabidopsis with 32.88% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT2G46495)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019446495.1)
• Pfam: Wall-associated receptor kinase galacturonan-binding (PF13947.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;