| Id Trinity | TRINITY_DN47139_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_310320 |
| Sequence | TTCTAATCAATAAATATCTATTGACTACTGTTGCTAAGAAATAAATTAAAGGCTATTTGTAGTGGGTTTGAACTTTCAAGAACTGAAAAACAATTCCTTC TCTTCTCATATTTCTCATCTCAAATTTATCAATGGTTTCCTTAACCCACTTATGTTTATTTTTCATCATTCTTCTCCATCTTCACACCATCATCACATGT GAAGAGATTTGTGAAACCATGTCATGTGGTGAAATTGATATTGAATTTCCTTTCAGTTTAAAAGGGGCCAATGGTAGTTGTAACAACCCAGACCCAAGTT TCCAACTTTCATGCGACAACAATAGTCGTACGATTCTGACACTCCCAAATTCTGGGGATTTGTTAGTTAAAAGGATCAATTATGAGAAACAAGTGATTCA AGTCAACGACCCAAATGGGTGTCTCCCCAAACGTTACTTACAAAACTTCACCTTTTCCATTTCCCTTCCTTTCATCTTTGATGTCACTGTTTATGATTTC TACGACCTTGTTTTCGTAAAGTGCCCTTCCAATCTATCTGACTCAATTTCACTTCCTTCAATTTCTTGTCTTCGAGAAACAAACGCTTCTTCTTCTTCTT CTTCGTATTATTATTCATTTTTTCGACATTATGTGAATGTGTCTGATTCATCATCAGTATTCTATGGGTGTGAGGTGATTTCTTCTAGTGTTGCTGTCCC CCTTCCAACTATGATGACGTGGCCAAATCTGAACCGTGATATTGAGTTGATATGGGACATACCCATTTGTGAGGATTGTGCTGCTCGTTCTCAACTTTGT GGCTTCGTTAATACTTCAACTTTTCAAGTCGGATGCATCTTTGACCCTAACCACACCACAGGTATGCCCCACTCTTCTTTTAGTCTTTAACAGCTTATCA GATATTGTGTATTTTGTAACACGACAGCCTTCACATGTTATCCACGATGAATCCAGAGTATGGCACACAATCAATTTTAAATATTATGTAGTATTTTATT CCCTCGATGGGGCCTCCTGGGGCTCGAACCATGACCTCATCGATTTATAGTCATCAGTTCTATTGAGTCGTAGCTTAATGATAGCGACTCAATAGAATCA ATAACTATAAGTCCCTCAGCTCATGGTTCGAGTGGTGGGAGGCTTCATTTAAGACAGTGATATGCTCAATAAATTCATAAATCCGAGGGAATGCTTGTCA ACGATGAGGATGGGGTGTTACATGTTTTCCATATTAGACCAAGATATTTATGGGTCATGATTCTTGGCCACTGATTTATGCAATACTCAACATGCAGGTG TTTCAAAAAGTCTCAAATATGGTTTAAGCATTGGATTGGGAATACCTGCACTCTTATGTATGATCGGGCTTTCTTGCTTTATTTACAAGAAATTCAAGAT TCACCACGGGCCCAACACAGAGCTTCCCAGTAATATCTCTGTTTTCAATCTTCAGCTACAGCCTGGTAATTTAACGGCAGGCCTGGATGGGCCTGAAATC GAGAAGTTTCCGAAGACTCTTATTGGTGAAAGTGGGCGCTTACCAAAGCCCAACAATAATATATGCCCAATATGCCTATGTGACTATGAGCCGAAGGAGA TGTTAAGGACAATACCTGAGTGCAACCATTATTTTCATGCATCATGTATAGATGAGTGGCTTAAGATGAATGCTACATGCCCCTTATGTAGGAATTCACC AGATGCAGCATCCTCTAATGTTGCATCCTCTTCCTCTTCTTCTTCTTCACGTACCATAGATAATCCAAGTCCAAATCACACATTTCATACAACTTAGACG ACTATTTTGAGTATTTTCACTATTTTGCCATCTGTAGTATACAATTTTCTCCCTTCCAAATACAAGAAGGACTTTACTATATGTTTTTTTGTAAAAGTAT CAATGTAAAGTGGCTCTTTTGCATGTAAAAATAAGGAGGAGCAAAACACAGAAAATGAGAAATGTCATAATTTTCATCATACCCATATCTTCGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_150104; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310320
| Blastp | RING-H2 finger protein ATL22 from Arabidopsis with 33.47% of identity |
|---|---|
| Blastx | Putative RING-H2 finger protein ATL69 from Arabidopsis with 47.69% of identity |
| Eggnog | zinc ion binding(ENOG41121N2) |
| Kegg | Link to kegg annotations (AT2G25410) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446495.1) |
| Pfam | Wall-associated receptor kinase galacturonan-binding (PF13947.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |