Ll_transcript_310350

• Id Trinity: TRINITY_DN47139_c6_g1_i2
• Name Transcript: Ll_transcript_310350
• Sequence: GTGAACCCTACAATATCTCCACCATCCTTCCGCCGTCGAAACCCATCTTCCTCTGCTTCCGCCGTGAAATCGAAATGTTGATGAGCCAAATTGGTTTCGG TGTGAAGTTTGGGAATTGGAGATGCTACGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAAAGTGAAGTTGCTGTTGTTGAAGGTGGTAATGGCAGA ATCTCAGAACGCCAACATATCCGTCTCGGTTTACCTAGCAAAGGTCGCATGGCCACTGACACCACCGACCTCCTCAAAAATTGTCAGTTATCTGTTAAAC AAGTCAATCCTAGACAGTATGTTGCTCAAATTCCTGAGCTCTCCAATTTTGAAGTATGGTTTCAGAGACCAAAAGATATTGTAAAAAAATTGGGATCTGG TGATCTTGACCTTGGTATTGTTGGTCTTGATACTTTCACTGAACATGGGCAGGGGAATGAAGATCTTATCATTGTTCATGAAGCTTTGGCCTATGGTGAT TGTCGTTTATCACTTGCGATTCCTCAATATGGAATATTTGAAAATATAAATTCACTGGAGGAGCTAGCTAAGATGCCTCAATGGACAGAATCAAAACCTT TGCGAGTTGCTACTGGATTCACCTATTTGGGTCCTAAATTTATGAAAGACAACGGTCTTAAGCACGTGACATTTTCAACTGCTGACGGAGCTCTGGAGGC AGCTCCTGCGATGGGGATAGCCGATGCTATCTTGGACCTTGTGAGTAGTGGTACCACACTAAGAGAAAACAACTTGAAGGAAATTGAAGGCGGAACTGTG TTGGAAAGCCAGGCTGTTCTTGTTGCAAGCAGGAAATCATTGGTCCAACGTAAAGGAGTACTAGACACAACACATGAGATTCTTGAAAGATTGGAGGCAC ATCTGAGGGCCATAGGGCAGTTCACGGTTACTGCAAACATGAGGGGAAGGAGTGATAAGGAAGTGGCTGAGAGAGTAGTGAGTCATCCATCATTATGTGG GTTGCAGGGACCCACTGTCAGTCCTGTTTTCGGCCCAGATGGGGAAGTAAAACACTACGCCATAGTCATATGTGTGCCCAAGAAGGCGTTATACAAGTCT ATGAAACAACTCAGAGCGATTGGAGGCAGTGGAGTTCTTGTATCACCCTTGACCTATATTTTTGATGAGGAAACTCCAAGATGGCGTAGACTCCTTTCTA CTCTTGGGATGTAAAATATTCCATAATATTTATTATTGTATTTTGGTATTGGCCTATAAATAGGACCAATCTTTTGTACTTTTGTATTAACTTCACGTCT ATCGGAATAATATTAGTCGGTGTAAGGAGTTGGTCTAGGGATGCAAGACTTTGTTGGATTCCCAAGTATCTAGCAATCAATACTTGTTGGATGAGACAAT AACATACCAAGTTTAATAAGAATGGTGATTAGATAATATGGGATACATGCTTTGGTGCATGATACTCTATGTGGTTCTTCAATTTTTACATGTTATAAGA CTTTCTTTTACGAGGGTATGGCTACTATAGTCATGATTCACAGTGATTCAT
• Tissue: pods
• Gene name: LI_gene_150112;
• Additional information: details;

Expression of Ll_transcript_310350

FPKM

• PAB: 13.5
• PNAB: 62.1
• PS1: 65.5
• PS2: 64.5
• PS3: 62.6
• PW1: 67.3
• PW2: 59.9
• PW3: 68.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_310350

• Blastp: ATP phosphoribosyltransferase 2, chloroplastic from Arabidopsis with 75.34% of identity
• Blastx: ATP phosphoribosyltransferase 2, chloroplastic from Arabidopsis with 77.78% of identity
• Eggnog: Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity (By similarity)(COG0040)
• Kegg: Link to kegg annotations (AT1G09795)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443309.1)
• Pfam: ATP phosphoribosyltransferase (PF01634.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;