Id Trinity | TRINITY_DN47141_c2_g1_i2 |
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Name Transcript | Ll_transcript_309804 |
Sequence | AAAAAAACCATAATCCCATTTTTTTTAATTAGTTTATGTTTTTGGCTTTGCATTCACTCATATAATCCCACGACATGAAACTGTCATATATTCCCTCCAC TCATTCCACCACCCTTCTCTTCTGTGTTCACAAAGTTCCCATCTTTCTTTGTTTTTCTCACCACTTTCTTCAACTTAGAGATACCCTTTTTCGGTTTTTC CATAATTCCAACCACTTTTAATGTTGTCTCCTAATAACCCCTCACAGAAACACGTGGAAACCATGCCAGTGTTGGATGGTTTCAGAAAGTTCAAACGTTT AAGGTTGTTTGAACTATCTGTGTGTGTTGCATTAATTTTTATAGCCACTGCTTTTGTTATATGCTTCTTCTTCTACTTACAATATAGAGAACAAACTGCA CCATTTAGACCCTCAGATTTAGTAGAGGAACAGTATCATTCAGTTGAGTTTGTTGAAGAAAAGGGTGGAGAGTGTGATTGGTTTGATGGTGATTGGGTTT GGGATGAAAGCTACCCTTTATATGAATCAAAAGATTGTAGATTTTTGGATATTGGGTTTAGGTGTTCTGAGAATGGAAGACCTGATTTGTTCTACAAAAA GTGGAGATGGCAACCCAAAAATTGCAACTTACCAAGATTCAATGCAATAAAGATGCTCGAAAAACTGCGAAACAAGCGAGTAGTCTTTGCTGGAGACTCA ATTGGGAGAAACCAATGGGAGTCACTATTATGTATGCTTTCTTCAGGAGTACCTAACAAGGATTCGATCTATGAAGTAAATGGCAGCCCAATTACAAAGC ACATGGGGTCCTTGGTTTTCAGATTCAGGGATTTTAACTGTACTGTGGAATACTACAGATCAACATTTCTTGTAGTGCAAGGTCGGCCTCCTACTGGATC CTCAGGAAATATTACGTATACGTTGAAAGTAGATAAAATGGATTGGAACTCAGTGAAATGGAGAGATGCAGATGTACTGGTTTTTAACACAGGGCACTGG TGGAATCATGAGAAAACTATAAGAAGTGGTTGTTATTTCCAAGAAGGTGATGAGGTTAAATTGGAAATGAAGATAGAAGATGCATATAAGAAGTCCATTG AGACAGTATTGAACTGGATACAGGACTCAGTAAATGCTACGAAAACTCAAGTTTTCTTTCGTTCTTACTCCCCAGTGCATTTCAGAGGTGGAGATTGGAG ACATGGTGGAAGCTGTCATATAGAAACACTGCCAGATTCTGGATCCTCAATGGTTCCTGATGATAACTGGTTAAAATTTAAGATAGCAAATTCTGTGTTA TTGGAACACACAAACATTTCTGAGACTATAAAGGTCAACGTATTGAATGTAACTCAGATGACAGCTCCAAGAAAAGATGGGCATTTATCTATCTATTATC TCGGTCCTAAGGCCGGCCCTGTGCCGCTTCATCGGCAAGATTGCAGCCATTGGTGTCTACCTGGTGTACCTGATACATGGAATGAATTGCTTTATGGAAT GTTCCTAGATCATGAAGGTGAACTCATACAAGGAACTAGTAATACTAATAGTTCACATAGAGCATTTTAATTGTTAATGGATTCATAGAAGCATTATGCA TAGGGGATAAGGAATGTTACGATAGTATAATATTTACGTATTGTCAGTGTAAAGATTTATACACATTATCTACCATTCATTTGTGTTACTTATTTTCTTG AAGAGTTAATGATCATTAAACATGAATCGTGCAGTGACTGTGTCAAACTCATTTACCGCCTGCTCATACATTTTTTCCTCATGTTACAATTGTTCCCCAG ATGCTAGAAGAGCAAGAATATAGAAGAATGCATGGAATTTGTTGCAGCAGATTTGAAATGAGAACAAAGGTCTCAGATTTCATCCATACACATAAGAATT ATCAATTTTGGAATACAATGGTGGTGCTGCTAGAAACATTAAGTTTTTTCATACTTGATTCCCCG BLAST |
Tissue | pods |
Gene name | LI_gene_150132; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309804
Blastp | Protein trichome birefringence-like 11 from Arabidopsis with 59.57% of identity |
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Blastx | Protein trichome birefringence-like 11 from Arabidopsis with 59.57% of identity |
Eggnog | Pfam:DUF231(ENOG410YIU5) |
Kegg | Link to kegg annotations (AT5G19160) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419164.1) |
Pfam | PMR5 N terminal Domain (PF14416.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |