| Id Trinity | TRINITY_DN47141_c3_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_309805 |
| Sequence | CTAATAAGAAATAGGGTATGATAGAAATTGGGGGTAGGTTTAGGTATTTCCAAGCAAAGAGGGTCTGTGAGCGTTGAAAACCAACACAAAGATTATACAA AACAGTTCTTACCCTTTTGCAATTCCATTGCATCCAAATCCAATTCCACTCTTTTTTTCTCAATCTTTTCAATTATATCCAAAACACTTGTTCTCTTAGT ATTTGTGAAAAAGCTCACATTTTTTGTTGCTTTTTTCAACCATTGATCTACGGAATTAGTGTATATATATAACAACACAGTCATAAACACGATGAGAGAA GACACTGAATGAGATTGCTTGGTTTTTTGTAACTGTTGATTGATTCTGATTTCAGTCACCACATCACTTCAAATCTTCAGATTTCAGTATCACTTTAACA GTTTGACTTGTCCAGCACCAACTTCTAGCAGTACTGTTTTGTGAGTTCTTAAGAATTCTTCCATAAAAGGAAGATGGGCTCCAGAATCCCATCTCATCAG CTTAGCAATGGCCTTTACGTATCTGGGAGGCCAGAGCAGCCGAAAGAAAGGACTCCAACCATGTCATCAGTGGCGGTGCCATATACTGGTGGCGACATCA AAAAATCGGGAGAACTGGGGAAAATGTTTGATATTCCTGTCGATGGATCTAAATCTAGGAAATCTGGACCAATAACAGGTGGTGCTCCTTCACGGACGCC ATCTTTTGGAGGAGTTGGTTCAAATTCTGGACCGATGCAGTCTAATGCTGCTGTCCGTGCTGTCTACACGTCAGGTCCCATGACTTCTGGAGGCACTGGG GCAAATTTACTAAAGAAATCGAATTCTGGACCGTTGAACAAGCATGGAGAACCTATTAAGAGGACTTCTGGTCCCCAGTCCAGTGGAGTAACACGTCACA ATTCTGGGCCTCTTCCTCCAGTTCTTCCTACAACAGGTCTTATTACATCTGGGCCGATATCATCTGGCCCGTTGAACTCTTCTGGTGCCCCTCGGAAAAT TTCCGGTCCTTTGGAAGCGACAGGCTCAATGAAGCTCTCAGGTTCTGCCACTGTTCACAATCAAGCTGTGACGATTCTCAGTGAACCTGTTGAGTTTTCC TTTAGAAGGAACATTCCAAAGGTGGTGTTATGGTTATTAATTCTGCTTTTTGTGATGGGTTTCATTGCTGGTGGTTTTATTTATGGAGCAGTGCAAAATC CCATTCTCCTTATTGTGGTTGTAGTACTCTTTGGCTTAGTTATTGCATCCTTTACTTGGAATATTTATTTTGGAAGAAGAGCTATTATGAGTTTTGTTGC TAATTATCCAGATTCTGAGCTTAGAACGGCAAAAAATGGGCAATTTGTGAAGGTCTCTGGGGTATGTTTTAACTTCTCTTGTCTAACTTACTAGTTAATC TTAGATTTTAGAGTGTAATATCTATGCACTGTCAGTGTTATGATTTATACACAGTCAATACATCCACCGTTAATTTGTGTTACTTTTTGGAAGAGTCAAT AATGATTAACATGAATGGTGGATGATGCAGTTACAGTGTATAAAACTCACACAATGTCAGTGCATACATTTTTTCTTTACATTTTATTTTTAATTAAACT TATTGGCTAATCATTGGGGTATGTTTAGCTTTTGATTTGTTTTTTGTTATCATGTGTTAAGAATTAAAAGTACAAAATGTCAAATTAAAAGTGCAAGAGT TTAATACCCTGGAAATGTCGAAAGCGTTTAATACTTTCTTCTTTAATTAATAAAATGTTGTTTTTTATTATGTAACCTGTGCCCAAAGGCACCCATAAAC AAAACACTTTTTAATTAGCATGTCGGAAGGATTAAAATCTACAAGCAGATTTAATCATGAACCCAAACTTCTGTCATCCATAAGAAATTATATGATTTCT ATTCTAGGGAAACAATAGCTTTACTTTTATTAGCTATGTAAAGTTATACAGCTAGGATAGATTCCTGGTATTTCCACAAATATATAGCTTCGGTACAAAT ATATAGCTTCTGTAGGGTTTAGATGAAGGTAAGTATATCCAAAATGGAACTTTATTTTCTTAATTTCTTTCAACGCATGGCCTCATCCTAAAGAAACATA TTTGAAAATTAGAGTAAAACTTTGTCATGGATGGAAAGTCCAGTGTAATTCTCATTGAATATAAGCTTTAAATGATATTTAGATGAGTGCATTTTGTTTT ATGTTCCTGGTTTGCATCCTCTAACCATGTTCATATTAGTATCACTGTTATACTTCATCATCGACTTATCTGATATCAGCACTTCCAAAAGGATAGCTAT AAGCTTATTTTGATATATGATGAAGGTTGTTACCTGCGGCAATGTGCCTCTCGAGTCATCTTTCCAGAAAGTCCCCAGATGTGTTTATACATCAACAAGT TTATGGGAGTATCGAGGATGGGACTCCAATTATTCCAATCCTTCACAACGTCAATTTAGTTGGGGCATGAGATTCCTGGAAAGGCGAGTGGTTGACTTTT ACATCTCAGATTTTCAGTCTGGTTTAAGAGCACTGGTTAAGGCTGGTCATGGAGCAAAGATGACCACTTATGTTGATGAAGAAGTTGTCCTCCAAGTTAA CCCTACTAAGGAAGAGTTGTCTCCGGAGTTCCTCCGATGGGTAGGAGACAGAAATCTTTCAAGTGATGGCCGCATCATGCATCTAGAAGAAGGGTATATT AAAGAAGGAAGCACAGTGAGCGTAATGGGAGTTGTTCAGAGGAATGACAGTGTGATTATGATTGTTCCTCCGCCGGAGCCGATCACGACGGGTTGTCAAT ATACCAAGTGTACTTTTCCAGCTAGCCTTGAGGGTATTATTTTAAGATGCGAGGACACATCGAAGACTGATGTGATACCAGTGTAAGAGTGTGTGATTGG TGTTCTTAGAAACTATTCTTTTCACTCCTATTTATTAGTGTTGGTATATCTTATTCACAGCTTGTCATCATAGATTAAGGTGGCAAAGTTGTTTGGCATT TTGTCATTCATAGACTAAGGATGGCAAAGTTATTTCACAGCTTGTCATCAATAGATTAAGATGGCAAAGTTGTTAGTTATTTCACACTTTTTCTTCCTTT TATATTGATGTATAGCTCTGGTTATGTTCTTCTAGGGATTATAAACTTTGGTAGTGTTTGATGCATGTGAAATGTTACATGTATGAGCATATTGTGATTA TGCTAACATGTTAAATAGAATACGACTTTTCTGTTGTTTTCAAATTTTCTATTCATCATGTGCTAATTAAATCTATATCTAGGTGCTTGTTGATCCAAGT TGTAAGATATTTTATTTATCTCAAGCAATGTTTCAGTTGAATTGGAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150133; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309805
| Blastp | Uncharacterized membrane protein At1g16860 from Arabidopsis with 66.23% of identity |
|---|---|
| Blastx | Uncharacterized membrane protein At1g16860 from Arabidopsis with 65.32% of identity |
| Eggnog | NA(ENOG410ZNXM) |
| Kegg | Link to kegg annotations (AT1G16860) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019426966.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |