Ll_transcript_309824

• Id Trinity: TRINITY_DN47141_c4_g1_i2
• Name Transcript: Ll_transcript_309824
• Sequence: GAAGAAGTGAAGACACTTTTACTTTTTCATATAATCTCCTGTGCATACTCTTGTTCCCTCCAATACCAAAGATGCTTTCACGATCTCTCTCTTCCCACAA AACCACACACCCTTCAATCTTCCTCTCACTAACCCACTCATTCTCCTCATCACCGCCGCCACCACCGTCACCGCCGCCACCACCGTCACCGCCGCCGCCG CATCCAGAAGACTCCGCCATTCTCCAAAGGCTCCACCACAAAGACTGGCTAACCCCTAAAGAAGTCACCACCCTCCTCAACTCCCTCACCCACCATTCCT CCGCCGTCACCCTCCTCCACCTCTACTCCTCCCGCAAAGACTTTAACCTCACCGAACCCTTCTGCGTCTCCCTCATCACGCGCCTCGCACGCGCCAAGCT CATCCACCCCATTCAATCCCTTCTCCAAACCCTCGCTCACGAGAAGAAACTCCGACGCTTCTCCGAAGACTTCTTCTACAGCGTCATTAAGCTCTATGCA CATTCCCTGAACCGAATTGATAAGGCTGTGGATACCCTTTACGCAATGCCCAGTTTCCGTTGCGTGCCGAGCACGAAAACGTTTAATTTCGTGCTCAATT TGCTTGTTTCGGCGAGGGTTTATGAGGTGGTGCACAAGGTTTATGCGTCGGCCGGGAGGTTGGGGGTTGAGGTGGATGCATGTTGTTTGAATATTTTGAT CAAAGGGTTGTGTGAGAGTGGGAAATTGGAAGCTGCGTATAAGGTGTTCGATGAATTTCCCAAGAGCGGGTTGGAGAGAAATGTGAGGACTTTCGCGACG CTGATGGATGGTTTGTGTGAAAAAGGAAGGGTGGAGGAGGCGATCGAGCTTTTGGAGGTGATGGAGAGGAGCGGGGTTAGCGGCGACACAATTGTGTACA ATGTGGTTATTAAGGGGTTGAGGAAGAAGGGGATGGTTGAGGAGGGGAAGCAGATGTTGGAGAGGATGATGAGGAAAGGGTGTTATCCGAGCGGGAGTTC TTATCAAGAGGTTTTGTATGGATTGCTTGATGCTGAGAGGTTTTCCGAGGCTAAGGATTTGATGGAGAGGATGGTTTTGAAGGAGAGGGTTAGTCCTAGT TTTGTGTCATATAAGGTTATGATAAAGGGGCTGTGTAAGAGGAATTTGGTTGAGGATGTTGATTGGGCTGTAAGGCAAATGGTGCTGCAGGGTTTTGCTC CGAGGATGGGGATGTGGAAGCAGATTGTTAAGTGTATGGTTTCCCAGGAAATAACTTCCAATTGTGTTTCTGTCGAAGAGATTTTGGAGGATACAGTACC AATTTCTCTGCCTTGCAATTGATATGGTAAGGCAACAAGTCGGACGGAGATCAACCGACTGAGGCATACTCGAGCCACATACCCAAGTTTTCAAGTAAAT AAATTTATGTGTATCCAAGCATACCTGATGTATACCTGTAACAGAGAATTATTTTTGGTGTACATGTGCTTCAGTGTGGAGGATTAACATGACGATGATA CAAACTTCTGAGGGAATATGAGACTTTACTTTTGTTTGTCTCCAGAGAAAGTGTAGTCTAACAGCTATGCATAGAACAAGTTCTATTTTTTTGTTTAGTC TACTATGATGATTCTTCCCTTCCTCAAATTCAGGATTGAGAAAATGGGTGCAAGCTCTAATGATTTCATGCAAAAGCAGGTGGGAGTGTTAGCATCATTT GGTCCTCCGGTCTTTCTGAGAGAATTTACAGCGAGAAACGGTTTAAGTCAGTGCTAGTGTATGATTCAGAAATGCACTCCTTGTTTCATTGTTATACTCT TGATAAGGATATACATAAACAATAATGCTGTTCTCAAAATCAAATTGTATTAACTTTAAGTTGTCCTTTGGTTTTAGAGATTAGAGGTGAAGTAATTTTT TTTTGTTTCCCGCATGTATCCTCGCACGGGAGGCAATCTTGTCTGAGCCGGGAACATCCACAGGTATGTGTGGCTAACTCTCCCGGCGGACATTTTTTCC ATCCACGAGGATCGAACCCGAGACCTTGCTTAAGGGAAATCAAGCATGTACCACTTGAACCAATGCCCGTTGGTAGAGGC
• Tissue: pods
• Gene name: LI_gene_150135;
• Additional information: details;

Expression of Ll_transcript_309824

FPKM

• PAB: 0
• PNAB: 1.5
• PS1: 1.7
• PS2: 0.2
• PS3: 2
• PW1: 0
• PW2: 0.7
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_309824

• Blastp: Pentatricopeptide repeat-containing protein At3g14580, mitochondrial from Arabidopsis with 48.02% of identity
• Blastx: Pentatricopeptide repeat-containing protein At3g14580, mitochondrial from Arabidopsis with 48.02% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT3G14580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019443824.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;