| Id Trinity | TRINITY_DN47141_c5_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_309842 |
| Sequence | GTAACTTCTCACTCTAAACGTATTCGAAAAACAAAAATAAAATAAAAAAATTCCAAAACAAAAGTTCTGGACTTTTCACAAACACAGGGCAAGCTTGTGG TTCATACTTCACACTTCATCATCCATGGCTACCACTAGAACCCTTTTGAAAGAGATGCTGCACCTTTCTTCCACCCTTCACTTTCCATCACTTCATCTTC GTCCCCTTTCTCTTCCTTTCCTCACTTCTCAATTCCCTCTCTCTCGCTCTTCTCCTTCAATTCGATGCGCTTCTTCAGATTCTAGCGCCAACAAAGTATC CTCTCGTCTCTCTCAGGTTCAACACCTTCTCCATCAAGCAGAAGAACGTGCTCTCTCCGCTGATACAGGACCCACTCCCAAAATCACATTGGGTCCGTTA TTTCTCATCAATTATCACCAATTTCTTATCCCGTTATATCCCGGAATGCCCAAAATGTTAATGGTTCGATTTCCGGGAGCCACACTTGCTGGGAGGGGAA ACCACATACACCGAAAAGAATTAGTTCCTTACTCGGAATGACAACGAGGGATTAGTAACAAAAAAGTAGAAATAGAGAAACCCTAATGACTGTTTTTATT TATTTATTTATTTATTTTTGTTTCAGATCATGTTACAGTTAGTTTTGCAAGAAGTGGTGGCCCAGGGGGTCAGAATGTAAATAAAGTGAATACTAAGGTG GATATGCGCTTCAATGTGCAAAATGCATATTGGCTCAGTGACAGAATCAGGGACAAAATTATTCAAATGGAGAAAAATCGCATTAACAAGGATGGGGAGC TTGTGATTTCTTCAACCAAAACTAGAACACAGAAGGGTAACATTGATGATGCTTTGGCAAAACTTCAGGAAATCATTGATGCAGCATCTTATGTCCCACC ACCTCCCTCAGAAGAGCAAAAGAAGAAAATCGCAAAGATGGCTGCCATAGGAGAACACAAACGTCTCAAAAGCAAGAAGGTGCTTTCAGATAAGAAGGCT TTCAGAAGAAGTAAAAATAGTTGGGACTAATACATTTTTCTCCGAATCCCTGAAAGCTGCATGGCACAGAAGCACAACCCCATGATGCTACCATGATTGG ATACATACACATTAGATGAATGATAACTATAGCCGGGAATTCGAGCGGCATGGCCCTACAATCAGCTAGCTTGCAAGATCCTCTCAGAAGTGGTTTGTGT CTACCTACTGGTAGTGATTCATAATTGGGACTTCAACTGATACAGAACCTTTTCAAAGAGAAATCCCAAATATTAATTGAATTTGTAATGTTTTCTTTGT CATTTTAAGTCCTTTCTCTTGAGTGACTTGGCAATTATAGGGCCTTCACGTCCCTGAGTTATAGGTCTATATAGTGAATGAATGTTAACTACCCCTTGTT CTCCTTTAATATATTTGTTTGCTTATCAAAAAGGAAACAACCATGGGAACATGCTTCATCTCAATATGTTGAATATGGATCTTGAATTTTTTGTTTTATC CAAGCCAGTAGCTGAACAATCTCATTTGTGTGATGTAAAATGTCATTTTGGTATCTGAGATTGCAAAAAAGAAAAGAAAAGTTAATTAGGTCTTTGACTT TGGACACTAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150142; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309842
| Blastp | Peptidyl-tRNA hydrolase ICT1, mitochondrial from Salmo with 40.2% of identity |
|---|---|
| Blastx | Peptidyl-tRNA hydrolase ICT1, mitochondrial from Mus with 43.18% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (100196025) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446666.1) |
| Pfam | RF-1 domain (PF00472.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |