| Id Trinity | TRINITY_DN47142_c2_g3_i10 |
|---|---|
| Name Transcript | Ll_transcript_309742 |
| Sequence | GGAAATGTGAGTATCATGCATACTTGCGTTGGTACTGAGTATCATATTTTAACAGGGAAGACAAGGCAGAATCTAACTATTCTTTTATTGCTTATTTTCT AAATTACTAGTCCGAGGAAACTGTCACTAATGTAATGAAGAGACCATTTTATATGGATTCAACAACGGCCAAGGAATTTGGTGTCATCGACAAAATTCTT TGGCGTGGCCAGGAAAAGGTTATGGCTGATGTTGCCCCTCCAGAGGTGTGGGACAAGGGTGCTGGTATTAAAGTTGTAGATGGATTTTAGTTCCTCTTTG TGGATACTTATATTGTCACTGTAAGTGAAATCATTTCTTCCTGTCATTTTATTCTTGCAAAATGTGGGATCCTTTTTTGCGTTGATGCGGCTTTTAGTTT TGGGGTTTGGGGAGCGAAGGGACTTTTGCAGCATGGGATTGGAGTGCAAGTACTAATTAGATGCTGTGTCCCTCGATTAGAACTTCTAAGCTTCTCTGGG TTTCAAATCTATAGGTGATTGAATCATACAATGTGGAATGTGGATATTAAAATATAGATCTTTATAAATTTGAACTGATTTCAAAAATATATTTATTTTG CCGTAACTGTGTTTGGAGTAGTTTAATAAATATTGCTTGGTGTATCTTAGCTTAAATAGTAGATAAAGTGAAAGAAAACTGATATTCACACACTTCTTTT TTGGGGCGTAGGAGTTGTAGAGAGGAGAGAGATAGGAAGAGAAGAGATTGGTGATATGGCGTGAGACGAAATAGATAGATAGATAGAAAGATAAGGTGTA AATGAGGATGTAGGCGACAGAATGGCAAGAATATTATGGTTGAAAGTGAAATAAAGGGATGGCGGAGAAACATTAGGCAAGTTTTGATTCAAGTTGGAAC TATATAGTTTAAAGCCTACTCTTACTTCTGCATTCTAATGTTTTAAATTGCCTAACCAGTTCAAGATAAGCCTATTTGAGAAGTGTAGTGAACAATGTGT CTGCAATGTAATGTGTAATTGTGTATCTATCATCTGAACTTTTTATATAAATCAAAGCCACAGCTTGGTATCTTTATATATACTTGGTAAATGTTTCACA CTATTTATTTTTGCTCTGCTATGTTATTAGTATTTTTAAGAATGTTATATGCTAGCGATAACTTTTTTTTTTTTGCATTTGAATCCCCTGATGTTTAGGT CTCGTGCAATTTACCGTGCAATGTTTGAAATTGTGTATTTCTCACCCTAAAATTGCCAAGTTGTGTGAATCGTCCCTTTTGTTAATCTTACCGTTAAATG TTTTACGGAAATAGTCACATGTGTAATATCAAAATTATAAAGTGACGTTTTTATTCGCACTAGCGAATGTATTTTTTAATAATTGGTTAAAGCAATCCTA AGAAGTAATAATCAGGACCCATCAATAGAGCAGTGATATAAGAATAAAAAGAGAGAGCAACTAAGGATATTCGAGTGAGTGAGAAATAGCTAGGGTATGA GAATTTGGTGATTCTCAACTGCTTCATGTCCATAAAGTGTTTGAAATGCCTTCAATCTCTTGCTTGAATTGCGTATTTTAAGCAGGTTTTCCAGGATTAG GATTTGGGTGAAAGAGGGGGTGAGGGATATTTTCTGGGAGAAAATAAATCATGTCTTGTGACTATTTCTGTTAATATTAGCGGTAAGATTTTCGGAAGGG ACGATCCGCACAATTTAACAATGTTATGGTGAAATATACTACTTTCAAATATTATTTGGTACAGACACAAACATCAAGTCACAACACATGTTCTGGACCC TATTACTATGAGAAGGGTTTTTCTTCATATTTTGTTAGACATATTCATAGAAAACTGAAGTGCTAGTTACTAGAATAACCCTTCTACCCCACAAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150152; |
| Additional information | - |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309742
| Blastp | - |
|---|---|
| Blastx | ATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic from Arabidopsis with 71.43% of identity |
| Eggnog | Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)(COG0740) |
| Kegg | Link to kegg annotations (AT1G09130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419900.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |