Ll_transcript_309756

Id TrinityTRINITY_DN47142_c2_g3_i17
Name TranscriptLl_transcript_309756
SequenceAAATAACATTCCTCATCCATTCCTTCATTCTACACTTCAAACAAACATGGCTACCTATTTGCGTTTACCTATTCTCACTTCTATCCCAACTTCTTCTTCA TTTTCTTCTTCTTCTTCTACTACTAGAAGAAGAAGCTTTACGACGCCGTTTTGTTCCATCAAATTTAACGCCCTAAACAAATCCAAAATCCCAATTCTAA ACCCTAATGACCCTTTTCTTTCAAAACTTGCTTCTGTAGCTGCTACTTCTCCTGAAACTTTGCTTAATCGTCCTATTCACTCTGATTCTCCTCCTTTTTT GGATATTTTCGATTCTCCTAAACTCATGGCTACACCTGCTCAAGTGGAAAGGTCTGTTTCATACAATGAACATCGTCCCAGAAGACCACCACCTGACCTT CCTTCACTGCTACTCCATGGTAGAATCATTTACATTGGCATGCCTTTGGTGCCAGCTGTTACAGAGCTTGTTGTTGCAGAGTTGATGTACCTGCAATGGA TGGATCCTAAAGAACCAATATATATTTACATAAATTCCACTGGGACTACTCGAGATGATGGTGAAACGGTAGGGATGGAGACAGAAGGTTTTGCCATTTA TGATGCAATGATGCAGTTAAAAAATGAGATACACACAGTGGCTGTGGGCGCTGCTATAGGTCAAGCCTGTCTACTACTTTCTGCAGGGACTCCGGGTAAA CGCTTTATGATGCCACATGCCAAAGCCATGATTCAGCAGCCCCGTGTTCCATCATCTGGGTTGATGCCTGCAAGTGATGTTCTTATTCGTGCAAAGGAGG TGATAATAAACAGGGATACACTTATAAAATTATTGGCCAAACACACAGGAAATTCCGAGGAAACTGTCACTAATGTAATGAAGAGACCATTTTATATGGA TTCAACAACGGCCAAGGAATTTGGTGTCATCGACAAAATTCTTTGGCGTGGCCAGGAAAAGGTTATGGCTGATGTTGCCCCTCCAGAGGTGTGGGACAAG GGTGCTGGTATTAAAGTTGTAGATGGATTTTAGTTCCTCTTTGTGGATACTTATATTGTCACTGTAAGTGAAATCATTTCTTCCTGTCATTTTATTCTTG CAAAATGTGGGATCCTTTTTTGCGTTGATGCGGCTTTTAGTTTTGGGGTTTGGGGAGCGAAGGGACTTTTGCAGCATGGGATTGGAGTGCAAGTACTAAT TAGATGCTGTGTCCCTCGATTAGAACTTCTAAGCTTCTCTGGGTTTCAAATCTATAGGTGATTGAATCATACAATGTGGAATGTGGATATTAAAATATAG ATCTTTATAAATTTGAACTGATTTCAAAAATATATTTATTTTGCCGTAACTGTGTTTGGAGTAGTTTAATAAATATTGCTTGGTGTATCTTAGCTTAAAT AGTAGATAAAGTGAAAGAAAACTGATATTCACACACTTCTTTTTTGGGGCGTAGGAGTTGTAGAGAGGAGAGAGATAGGAAGAGAAGAGATTGGTGATAT GGCGTGAGACGAAATAGATAGATAGATAGAAAGATAAGGTGTAAATGAGGATGTAGGCGACAGAATGGCAAGAATATTATGGTTGAAAGTGAAATAAAGG GATGGCGGAGAAACATTAGGCAAGTTTTGATTCAAGTTGGAACTATATAGTTTAAAGCCTACTCTTACTTCTGCATTCTAATGTTTTAAATTGCCTAACC AGTTCAAGATAAGCCTATTTGAGAAGTGTAGTGAACAATGTGTCTGCAATGTAATGTGTAATTGTGTATCTATCATCTGAACTTTTTATATAAATCAAAG CCACAGCTTGGTATCTTTATATATACTTGGTAAATGTTTCACACTATTTATTTTTGCTCTGCTATGTTATTAGTATTTTTAAGAATGTTATATGCTAGCG ATAACTTTTTTTTTTTTGCATTTGAATCCCCTGATGTTTAGGTCTCGTGCAATTTACCGTGCAATGTTTGAAATTGTGTATTTCTCACCCTAAAATTGCC AAGTTGTGTGAATCGTCCCTTTTGTTAATCTTACCGTTAAATGTTTTACGGAAATAGTCACATGTGTAATATCAAAATTATAAAGTGACGTTTTTATTCG CACTAGCGAATGTATTTTTTAATAATTGGTTAAAGCAATCCTAAGAAGTAATAATCAGGACCCATCAATAGAGCAGTGATATAAGAATAAAAAGAGAGAG CAACTAAGGATATTCGAGTGAGTGAGAAATAGCTAGGGTATGAGAATTTGGTGATTCTCAACTGCTTCATGTCCATAAAGTGTTTGAAATGCCTTCAATC TCTTGCTTGAATTGCGTATTTTAAGCAGGTTTTCCAGGATTAGGATTTGGGTGAAAGAGGGGGTGAGGGATATTTTCTGGGAGAAAATAAATCATGTCTT GTGACTATTTCTGTTAATATTAGCGGTAAGATTTTCGGAAGGGACGATCCGCACAATTTAACAATGTTATGGTGAAATATACTACTTTCAAATATTATTT GGTACAGACACAAACATCAAGTCACAACACATGTTCTGGACCCTATTACTATGAGAAGGGTTTTTCTTCATATTTTGTTAGACATATTCATAGAAAACTG AAGTGCTAGTTACTAGAATAACCCTTCTACCCCACAAAAAA BLAST
Tissuepods
Gene nameLI_gene_150152; 
Additional informationdetails; 

Expression of Ll_transcript_309756

Labels

PAB abscising pods
PNAB non-abscising pods
PS1 seeds stages 1-3
PS2 seeds stages 4-6
PS3 seeds stages 7-8
PW1 pods wall stages 1-3
PW2 pods wall stages 4-6
PW3 pods wall stages 7-8

Annotations of Ll_transcript_309756
BlastpATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic from Arabidopsis with 74.47% of identity
BlastxATP-dependent Clp protease proteolytic subunit-related protein 3, chloroplastic from Arabidopsis with 80.9% of identity
EggnogCleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity)(COG0740)
KeggLink to kegg annotations (AT1G09130)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019419900.1)
PfamClp protease (PF00574.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;