| Id Trinity | TRINITY_DN47142_c2_g3_i6 |
|---|---|
| Name Transcript | Ll_transcript_309737 |
| Sequence | ACGGAATAGAATTGGGCGTAGAGGGTTTTGTTTGGTTTGTGTATAGTCGTGTTCCCATCTTTGGAGGGTTTTGTTTGGTTTGTGTAGTTCTGTGTTCCCA TCTTTGGAGGGTTTTGTTTGGCTTGTGTGTAGTTGTGTGCCCTTCTTCGGAGGGTTTTGTTTGGGTTGTGTAGTTCTGTTCCTTTCTTTCTCACTATTGC CGTTGCTCCTGCAATCTCCCTCCATCAGAATGACCAGCATGAGCGCAAAGTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACTACTACTACTAC CTCTAGTGCCCAAAAGATGTCTATATTTGGTGCTGCTTCTGCTGCTGCGAAATCTGGATTTGTGATCCCTAAAAACAAATTATCTGGTTCATTGGTTCCT GTTTTTCAAAAACAACATGGACCCATCATTCACAGGATAACTAAATGGGGCACTGATCTCACACAGGATCCACAGGTCACCAAGGGAAAGGCTTTAGCTT TACAGATTCGAGTACATCAAATTACGAAGCAGTTGGAATCAGGAATATTGGAGGCTGGGAACACTCACCACTTCAATCCAGATAAAACCAACTCTCAGAC AGAAATACTCCAACTTGAAAAGCGGGAAGCGATAGCTGAAATACTCAAATTGGATCCTAGTTACAAACCTCCACCTGGTTTTAAACCCTTGTTCAAAGAG GCCACTCTTCCTTTGCCTGTCCAAGAATATCCTGGCTACAATTTTATTGGTTTAATATACGGGCCTGAAGGTGATAATCAAAAGCGACTAGAAAAGGAAA CTGGTGCCAAGATAAAAGTTTACGGAACTAAAGCAGACACAGGAGAGAAAGTAAGTTCCCAAGTGGCTTTTGTTCTTCATGAACTTGATTTTTTCAAGCA AAACACAATTATTGTTTGCATCTGCTATCTGTTTTCCATTCATTTAACTGTTCCATTTCAGGGTGAAATTAAACCAGGAGCTGATAACAAGTGCAGTTAT GATGAGATGCATGTTAATGTATCAGCTGATAGTTTTGATAAAGTTGATGTAGCAGTTTCCATCATTGAACTACTAATTACCTCTGTAATTGGGAATTTAG CTGCTAATTCCACACCTGCTGTATCAGTTTCCAGGGATAGCACTAATGTTATAAGTCAAAGCAAAGATGGATCCCCTTCTCATGCAGTTTCTGCGGCTTT GGCAAACCAGGCTATGGTGCAACCAGCAGCTTTTTCACAAATTCATGGAGATCACCTTCAATACCCTGGTCCATGGTTTTCAGCAGTTCCGTCTCATGCA CCTGTATTTGTTTCTTCTGCCAATATAGCCACTCCAAATCCATCAGGTCTTACCAGAACTCATTTTCCATCACAAACATTGAATCCTGCCAGCATGGCTT CAACATTTGGTGCTCAACCTGGATTCCACCCAATTTTTCCAAATCAACATGTTTCTATGCAAGCGCCACCACCAAGACAGATCTCACAGCATTCACATAT TACTCAGGCAAGTCCTTTGGGTCACATTGGGCCACCCAGAAATCCTTCCATAATATCTGCACATAATTTGTCAGCTCCGAGAAATGCTTCACCAATAGGA CAACCCCAGATATCAATGCCTTCTGCACAAAATAGTGCACCTGTGGCTGGTAAAATGTCTCTAGGTCTCAGCAGTATGGGGCCTATGCCTCCACCTGTAA CACCTGTTTCTCTGCATCAACAACTGGATATTGCATTTAAGCCACCGCAGTCTAACATGTTGATGATGCCACGGTCTGCTGCTTTTCCTACACATCAAGC AGGATTTCCCCCTGGACTGCCCTCATCATTGGGATCAATGCCTCCTCCACTTACTCATTCATCTGTAAACCATTTATCAGGACCTGGTTCATTTCCATTA CGTCAGCAATCAGGAATACCCAATTCTGCTTCTAGAGTTGCTCCTTACCACACCAATGTTAAACCACCTCTCCTGATGGCATCAAATTCTGGAAATTTTA CTTTTCACTCGCAGCGGCCGAACACTGAGTTTCAATTCGTCTCAATACCAAACAGTCAAGCTACTACTCATGGCGCTTCACAAGAATTGCCACCTTCAGG TCCACAGCAACTGCAATTTGGGTTTCCAAGGACACAAGTTCCCAACCAGGTGGATCAAATTCAAGCTCATGCCTCTACTGTTCCATTTGCAGGAAGATCA GGTTCTGTCTCAATTCCACCGAGAAACACAGCATTCCCATATGCTGGTCAACCTCCAGTCCCACAAATGGGTATGAAGAACTTCATATCTGCACCTCAAA TGCCAAATTTGCCAAATCCTGGTGTACCAAGAAACATGCATATTCAACACAATTATCCTGCTCAGAGGCCATGGACTCTGAATCAGAAATTCGGCAGCAA TCACACCATGGCTTCTGGTAAGCCAGCATATCCAGTGGACCAGATTTATGATCCTTTTTCACCTACTTCTGTTGCACCTCCACAGCACAAAGGTAATCCT GGAAAATGAGGAAACCTGGTAGGGCTGCAGATACGTAATCACCAAAAGGGTCTTCAGAAGAGAGGTGTATGCAATCTTCCCCTTGTTGGCAGAACAGATG GTACTAATTTCATAGGTTTATTATAGGCATGTGGTTATAAAATCACTTAATTTCTGATTGTATTTTAATGCAAGGTTATCGCCAAGGCTCAATTAAGGGT TTACTCTGGTGAGTCTTTTAAAAAAGAGTAAATTACACAGACATGCCATGAGTTTTAATCAAAAGACATGAACTACCCTTCCCTTTTTTGCGGATACACA AACCACCCTTGATTTATATATGCACATTACATTGACCACTCTTGTTGTTAGTTAACCGTTAAATAATAGTGTCAGGAGCATATTACACGTTGTGTAATGA AAAATGATGACAAAAATACCTCCTTTTGACTTCATATAAAAGTTTCAATATATTGCTTACAACTTGTTTAATAAAATCACTAACATCGTTGATTAATGAA TTATCGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_150152; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309737
| Blastp | Branchpoint-bridging protein from Dictyostelium with 28.29% of identity |
|---|---|
| Blastx | Branchpoint-bridging protein from Dictyostelium with 28.29% of identity |
| Eggnog | mRNA processing(COG5176) |
| Kegg | Link to kegg annotations (DDB_G0293554) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019414553.1) |
| Pfam | KH domain (PF00013.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |