| Id Trinity | TRINITY_DN47150_c4_g2_i2 |
|---|---|
| Name Transcript | Ll_transcript_311093 |
| Sequence | CTGCACGAGCCTCGTTGGAAAGTAAACGTGAAAACTGAAAAATCAAATAATACTTCAAAAAAATAAAAAATAAAAAATAAAAAAGAAAAGTAAAAAGGTG TGCGTGTGTACCCATCGATTAATTGATTAATAAAATTTTGATGTGGGATCTAGAATCCTTTGTTACAGTCGAGAGAGAAGGATTCTTCTTCTATCTAGGG TTCCTGAATCCGATTCTTACTCTGAAAATTTTCAATGCGATTGTGAGATTCAACTACCAATTATTTCGATTCGATGGAGGAATCTTACACTGGCCTCCCC AGTAGCCATTTACTCGGTTCAGTTCCTGTCAGTTTTTCCATTTCTTACTTCTTTCATAATAATTCATCTCTTGCTTCTTCGATTGTCTTTCTCTTTTAAT TAACCGTTTCTGATTTTCTTTGGTTCTGTTATTCTTCTGATTGGTTCACAGGCTGTGATAGCTGAAGAAAATAATGTCACAAGACATGAAGGAATGAATG TGAATGTAGTTCCGGATGCAAATATGGAAATATTCCCTCCCAACAATGGCGGAGGCGGAGGAGGTAGAGGACGCGGTGGAGGCGGAGGAGGTTATCAAAC TCTTGGAAGTCCAACTCCTGGTATGTTATATCAACGTTTTCATGCTTCATGTTGAGATGGTTTTTGTAATTTTCTGATCTTTGTTTTTTCGTTTTAATAA TTTTCTTGATATTTTTGTATCCCACAGCTATTTCCTGATGACAATTAGTATACACTTTATAAGGAATTGATGAGTTGTGCAGAGAAGATTTTTACTTGTT TAGTTTTAGCTATGTTAGAAATTGCAAACTTAATTAGAGCTTCCAAGCAGATTCTTTCCCTCTTTACATGATAATCTTTGCAAATGTGTTATTATATCTG CCACGCAGGAAACTGCCGCCTTCTAATTAAGTTCTCGTCTTGCCTTTTATGCTTTGGCCTCGGTTGAATCTACCACTGGCCATCATCTAATTAAGTTTTC ATATTGTTTTTTTGTTTTTTGGGGTGAAAGTTCTCATATTTATTTTGTCCTGAACTATCCTCTAACCTTAGAATCAAAATAACATTATATAGTTCTTTAA TCACTTTGATATGTTTCTACTTCAATCTCATATATACTCATTAGTTGTTTGCGTACTCCTTCCGATTATGATTGGTGAGAACTTCCTCCTCTTTTCCCCT TTTTCCAGTTTTTCAAGTCTTATTTTATTAAATGATGTCCACTGCATTAAATGTAGAAATACTTCATGAGTGGCATTTACACTCTACTAGTGTTTTGTAC AAATCAATATAATGCCATATGCAAACACCCAAAAAATTTCTAATTATGGCACTATTTAATTAAGAATTGCATATCTTAGTTGAAATGGTTCCAGCAGTTA ACCAAATTATCTTCTGGTTTTTAACTGATCTTCGGTTGCTTCTATCAGAGTAGAGAGCACCTGCTATTTGTATTTTCATTGTCATTTGCTGCTAGAATAT GCCATTTATTAATCTCTGGTTTATTCATCCTTGTAGACACTTATGAACAACAGCCAACAAGCAGCTGGAGAGGAGTCTTTAGTGTCTCATCTTACACACA GTATTTCAATATAGATACAGATGATGTCGTAACCAGATTATTAAGTTCCTTGAATCCAGTTGGTGGAGACTTTTTCAGCAAGATAGATGCTAACCCTGAT TTGTATGTTGTACACTTATGCTTACTTACCTTTGTGCTGTTATACATCAAAACAGAGATACTGATTTGGATTACATGTCAATATAGAGCCTTGCTTCCTC CTATATCCTCCTAACACTGAATAAAAACAATTAATAAATGAAAAGGTAAATACAGCATCGTTTTGGAAAAATAAATAGCATTCGAAATTCTCTCTAGTAT TTGAGGTTTTTAGGAGTGTGAATTTGGAGGATTTAGAATTATTCATCGAAATATGGTTACATGGAATAAAAATTTAATTGAAATGAACTCTTACAATAAC CTTTATACAGAAACACCTCTTGTTTACTTCTCGCCCCCTCCATCTTTTTTATAGATATCTAAGTCAAGGTATGGAAGACATTTGCTGAATTTGTTCCATA TTTTCAGGATCCTGCCCCAAAGCATAATTATGCATATCAAACGAGTATTGAATACTAATAGTGTGATTCTTTTCTGTTATTATAGATATGGGCTTATATG GATCTCAACAACATTGGTTTTTGTGCTTGCATCACTTGGAAATCTTGCAACATACCTGATGCGAAAACATGCAGATAGTAGTACTGCTTGGAGCTTTGAT GTTAGCTATGTGAATATGGCTGCATGCTCTATCTATGGCTATGCGATAGTGGTCCCATTGGCATACTATTTCTTCCTTCAGTATATGGGTTCAAATGCTA GCCTTATAAGGTTTTGGTGCATGTGGGGATATTCTCTCACCATTTTCATCATCTCCTCTGTAAGTTTCTGCTTTGTCCAATGTGGTAAACTATGTAATTA TCATACTAAAAATAATAATACATACATTTATTTTCATGTTAAAGTGTTAAACTACATGCGTTGTGGGGAATGTGGGTCTGAAGGGGGAAATTGGCAGGGA GGGAAACTTCTAACAAGTTAGGCACTCCTCCATCACAGGTGGAAGAGCCTTTGGGTTCAAACTTATATGCAGTACCACTATAGAGCCAAGGCTCAGGTGG TAATAAGATTGTGAAGCAGGAACCGAGGTCTAATGAGTTTTGTTTTACGTTTATCATTTATATTCCACTTACAAGCTGAAACTTTATCTGGTTTATAGGA AATTACATTAGCTTGCTAATTATGCTGTATTGAAAATAATCTTTTTATTATTAAGATAATTTTTGTATTAGCTTTCATGTTACCATCTATCTAATTCATA TATATTTCTTGGGAAACTTTCAGTTTCTGTTGATGATTCCATTTGAGTTTCTTCGGTGGACTATAATAATCGCTACTGGTGCTTCCTCAGCTAGCTTTGT TGCCCTAAACCTGAGGTCTTACATTGAAGGCAATGATCTATCAGTGGCTATAGTTGCTGCATTTTTATTGCAAATAGCTTTGGCAGTCTTCATCAAGGTT TGGTTCTTCGTGTAGCAGAATGCATTGCAGTACAAATAAGACCCAATCGCTATCAGCCTTAGCTAAACCTTAAGATGAAAGTGGAATTATGTGTAGCAAC GGTTGGTTTGTGTTTTTTTGGCTTTTCTATAATGGAATAGATAGTTAAAGAGAGAGTGGTGCGATTGGTAGTGCTTTTTCTGTATCAGCTTTGCTTTTTT GGTCAAGAGCCTTCTGGCAGACCAACATTTTGTAAGGAGAACAATCGTTGATGTAGCATTTGTCTCTTGAGTGTTTGAGCTTCTTTGCATGTTTGCGTAA ATATACTACGTCCATGAATTTTGTATTTTTTGTACTTTTTTTTAAAAGAAAATCCAAGCAGCTGTCTCATGATATGTTATGATCTTGCATGTAGTTATCC CTAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_150219; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311093
| Blastp | Protein YIPF1 homolog from Dictyostelium with 33.7% of identity |
|---|---|
| Blastx | Protein YIPF1 homolog from Dictyostelium with 33.7% of identity |
| Eggnog | Yip1 domain family(ENOG4110TJR) |
| Kegg | Link to kegg annotations (DDB_G0281587) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460613.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |