Id Trinity | TRINITY_DN47154_c0_g2_i4 |
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Name Transcript | Ll_transcript_311146 |
Sequence | CACCAGTTGAATTTCCAGATACAGCTTAGCTTTAAGGTGTCAATCACATACATATCTTCTATTTCTATATTTCACTTCTATTATGATATGAATGTTACAA CTTGTCTAGTAATATTTTGGTTGGTTTGTTTTGCTATATGGATATTGGAGCAGTGAGTTTGGATGGGTTGGTGGGTTCAGAACTTGTTTCAGATCCTGAG ACAAAGCACAATAAGTGGTACGGTTTTGGGTTCCTTAAGCATGAGAGATCTAGAACAACAACTGAACATGACTTGAGGAGTTCTAAACTGGCTAAGACTA TTGATGACATGTCTCTTGTCTCAAAACCAATGCTGTTCAAGAACAATAATAACTCATTACTTAGATCTAATGTTACTCTCTTTTCAGATGGTGAACAAAT GCTTACTTTCTCTTCTCCTAAATCTCACTCTTTGTTAGTGGATAAGTCCTCCCAAAATCCCACTTTTCCATTTTCCTATCACCCCTTATCCACTCACAAC AAAAATACAGGTACAATTCTGCAAAATATTTTTCAGCTGCTTTATATTTATGACCCAACAACAACTCATTACTTAGATCTAATGATATTCTCTTTTACGT GGAATCAATAATCAAGCATGTAGCTTTATTTTATTTTACCTTTTTAGAGGAAGAATGAAAGAATTTATATTTGAAGGTTCAATTAAATTTTGGGATGCTT AAAAAAAGCATTTATGGATAAAGTTGATTTATTTATTTTGTAAAGGTTTGATTCTACAGTACTGTAGGAGGGGTCTTTTCATGGAGACATGAATAGGAGT TGTTTCTGTGTTGAATCACTGTCTAAGTGAAAAGTGAAGCAATGAAATTCCTCTGATATAAAAGATGTCTTCCAGTTTTAGGGAGAGGGAATTTCTCAAA TTTTGCACAATAAACTAGAGGTTATAAAAGGAGAAAAATACAAGAAAGCCATGGTAGAGCTATAGGAGCATGAAAAGCCCCTATTTTGGTTGGTCATGCA CTCTCTTTCTCTGAAATATTTCTTTCCCTTTCCATCTCTTTCTTACTCTCAAAGGAGGGAACATATTTGTAATGTAGTCTTGTAATTGATTTACACTCCT GTTATCCTCCACACATCTTTTAGCTTTTCAGAATAAGTAACTTTCTCTTTTTGTGTTTTAACTCCATTAAGTTATGAAAATGGCTTCTATATTTGTCTTT CTATGTTCCCATTTTTTCCTGAGTTTGACCATGTGTTGTGTTATCAGCAGGTTACAGTTCTGAAAGCATGCATGGGATTCTACCTGGGACTAGAGGGCTA TTCACTCCATCTCAGTGGATGGAGCTAGAGCATCAAGCCCTGATCTACAAGTACATAATAGCAAATGTTCCTGTTCCATCTCATCTACTCATTCCTATCA AGAAAGCCCTTGACTCTATTGGCTTCTGTAACTTCTCAAATGGTCTTCTCAGACCCACTGCAAGTATGATCCTTTCTCTGGCCTAATCATAAAGCTTGAG TCTTCAATTTCATTATATTAGATCTTTAAAACTCCCTCATTTTTTAGTCTTATTCAATATTCATGAAATGATAAGCAATTAACAAAGATCCAGGGGGGTT GTAGTGTGCATAGCCTAATGCAGATTAGGAACCTCTCATAATTTTCTCTTATTTGATTTTGCTGAAGAGAGACATAGGCATATGATGGGTCATGAATGAC ATTCCATAAATCTTAAATGGACCGACTAATAAAATTTCTCTGTCTGTCTATCCACATGACTACATAAGAGATAACGTGGTTATGTTACACTTGTCAATTG ATACAACCATGCTTGTTGGGTTTTTTGTTCTATTTTGTTACAAATTAATTGGTTGTTTTTGTTATTGTTGTTATTGTTGCAGTGGGATGGGGAGGTTTCC ATCTGGGATTCTCAAACAACACCGATCCGGAGCCAGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGATGCTCGAGAGATGCCGTTGTGGATCAGAA ATATTGTGAGCGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTTACTGGGACAACTTCTACCACCAAC ACTACAAATAGTGCGATCGTCACCACTTCGAAGCAAAGGATGATGCCGGATAACAATGCAGTGGTGCCCAGGAGCAGTGCATCAAACAACCTCACCTTTA CACAACAACATGAGCCCAAGAATATTCAGACTCTTGCATCTGATACTTCTGCTCCTTACAACATCAACAGGATGTTTATGAACAAGGAGAATGGCAGTGA GAAAATCCCCAATGCCCATGCCCTCCCGATGCTGCCTCCCACGCTTGAGCTGAATCCCAAAGAAAACCCCTTCATGATGCATAAACAGCAATTCCAGTAT GAGGAATCCTCAAGGAATGAGTTTGGTTTTGTCACTTCTGATTCCCTACTTAACCCTTCACAGAAAAGCTCTACCTTGCAAACTAGCAGCAGAAGCTTCG GTTCATCGCAAAACCAAACTAACCAAGAAACAGATTCTCAACATTTCCTTAGACATTTCATTGATGACTGGCCTAAAACTCAGTCTAATAGCTCAGGTCT CGCTTGGCCTGAACTTCACATGCAATCAGACAGGACCGAGTTATCAATTTCGGTCCCAATGACTTCCACAGATTTCATGTCATCCACTTCCTCTCCCTCC ACCGAGAAGGTCACGCTGTCGCCTCTCCGGTTATCAAAGGCTTTAGACCCAATTCAAATGGGTTTAGGTGTAGGAAATACTCATGCTCTCAGCGAGTCGA ACAACAGTAGGGAAGCTAATTGGATTCCAATTACTTGGGACAGTTCAATGGGTGGTCCTCTTGGAGAGGTTCTGAATGTTAGCAATAATAATAATGCAAG TGATCACAGTGCCAAGAACAATTCTTCTTCTGCCCTTAACCTCATGAGTGATGGGTGGGACAATAGTCCCTCCTTAGGGTCTTCTCCTACTGGGGTCTTA CAAAAGACAACATTTGGATCTCTATCTAATAGCAGTGCTGGGAGCAGCCCAAGGGCAGAGAAGAAAACCGAAGAAGGAGCTGAAAAAGATACTCTCCATT AATGGATAAACATGTTATTTAAGGTTGCACTTCTCTTTGCTTTTTTATGTATCTGTCTCTCCATTAATCGAGAGGATCCTAACTCGGAAGGAGTCACTTG TGCAATCATTTCATTGGTTCAACTCTTGGGAATTGAATTGAATTGAAGGAGAAACAAGTTTTTATGTGTTGTCTGTATCTTAAGAGTTCAGTTTTTTATT GCTGCCCCTAATATGGTAATGTATGAATGTTAAAAAACATTGTTCTTATTATAAATTGTTTGTGTAGGTTTTGCTTTTGCTTGACTTTGTTTTGTATTAA TGTCCTTGTGTTCTGTGCACGTTTTGAGAAGTTTGTATGTGGAATTGGTTTATTGAAGTTTTGGTCATGTGGGGACTTCTGTCCAAAAGAGACAATGTCC CGGTTCAATATAATAACATCAAATAATGTAGAAAAAATAACTTCATGTTTATATTTTTATTTTCCAATAAAAT BLAST |
Tissue | pods |
Gene name | LI_gene_150258; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311146
Blastp | Growth-regulating factor 6 from Oryza sativa with 38.58% of identity |
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Blastx | Growth-regulating factor 6 from Oryza sativa with 44.09% of identity |
Eggnog | growth-regulating factor(ENOG4111S3M) |
Kegg | Link to kegg annotations (4333990) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417477.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |