| Id Trinity | TRINITY_DN47154_c0_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_311149 |
| Sequence | CACCAGTTGAATTTCCAGATACAGCTTAGCTTTAAGGTGTCAATCACATACATATCTTCTATTTCTATATTTCACTTCTATTATGATATGAATGTTACAA CTTGTCTAGTAATATTTTGGTTGGTTTGTTTTGCTATATGGATATTGGAGCAGTGAGTTTGGATGGGTTGGTGGGTTCAGAACTTGTTTCAGATCCTGAG ACAAAGCACAATAAGTGGTACGGTTTTGGGTTCCTTAAGCATGAGAGATCTAGAACAACAACTGAACATGACTTGAGGAGTTCTAAACTGGCTAAGACTA TTGATGACATGTCTCTTGTCTCAAAACCAATGCTGTTCAAGAACAATAATAACTCATTACTTAGATCTAATGTTACTCTCTTTTCAGATGGTGAACAAAT GCTTACTTTCTCTTCTCCTAAATCTCACTCTTTGTTAGTGGATAAGTCCTCCCAAAATCCCACTTTTCCATTTTCCTATCACCCCTTATCCACTCACAAC AAAAATACAGGTACAATTCTGCAAAATATTTTTCAGCTGCTTTATATTTATGACCCAACAACAACTCATTACTTAGATCTAATGATATTCTCTTTTACGT GGAATCAATAATCAAGCATGTAGCTTTATTTTATTTTACCTTTTTAGAGGAAGAATGAAAGAATTTATATTTGAAGGTTCAATTAAATTTTGGGATGCTT AAAAAAAGCATTTATGGATAAAGTTGATTTATTTATTTTGTAAAGGTTTGATTCTACAGTACTGTAGGAGGGGTCTTTTCATGGAGACATGAATAGGAGT TGTTTCTGTGTTGAATCACTGTCTAAGTGAAAAGTGAAGCAATGAAATTCCTCTGATATAAAAGATGTCTTCCAGTTTTAGGGAGAGGGAATTTCTCAAA TTTTGCACAATAAACTAGAGGTTATAAAAGGAGAAAAATACAAGAAAGCCATGGTAGAGCTATAGGAGCATGAAAAGCCCCTATTTTGGTTGGTCATGCA CTCTCTTTCTCTGAAATATTTCTTTCCCTTTCCATCTCTTTCTTACTCTCAAAGGAGGGAACATATTTGTAATGTAGTCTTGTAATTGATTTACACTCCT GTTATCCTCCACACATCTTTTAGCTTTTCAGAATAAGTAACTTTCTCTTTTTGTGTTTTAACTCCATTAAGTTATGAAAATGGCTTCTATATTTGTCTTT CTATGTTCCCATTTTTTCCTGAGTTTGACCATGTGTTGTGTTATCAGCAGGTTACAGTTCTGAAAGCATGCATGGGATTCTACCTGGGACTAGAGGGCTA TTCACTCCATCTCAGTGGATGGAGCTAGAGCATCAAGCCCTGATCTACAAGTACATAATAGCAAATGTTCCTGTTCCATCTCATCTACTCATTCCTATCA AGAAAGCCCTTGACTCTATTGGCTTCTGTAACTTCTCAAATGGTCTTCTCAGACCCACTGCAAGTATGATCCTTTCTCTGGCCTAATCATAAAGCTTGAG TCTTCAATTTCATTATATTAGATCTTTAAAACTCCCTCATTTTTTAGTCTTATTCAATATTCATGAAATGATAAGCAATTAACAAAGATCCAGGGGGGTT GTAGTGTGCATAGCCTAATGCAGATTAGGAACCTCTCATAATTTTCTCTTATTTGATTTTGCTGAAGAGAGACATAGGCATATGATGGGTCATGAATGAC ATTCCATAAATCTTAAATGGACCGACTAATAAAATTTCTCTGTCTGTCTATCCACATGACTACATAAGAGATAACGTGGTTATGTTACACTTGTCAATTG ATACAACCATGCTTGTTGGGTTTTTTGTTCTATTTTGTTACAAATTAATTGGTTGTTTTTGTTATTGTTGTTATTGTTGCAGTGGGATGGGGAGGTTTCC ATCTGGGATTCTCAAACAACACCGATCCGGAGCCAGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGATGCTCGAGAGATGCCGTTGTGGATCAGAA ATATTGTGAGCGGCATATGAACAGAGGACGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCCTTACTGGGACAACTTCTACCACCAAC ACTACAAATAGTGCGATCGTCACCACTTCGAAGCAAAGGATGATGCCGGATAACAATGCAGTGGTGCCCAGGAGCAGTGCATCAAACAACCTCACCTTTA CACAACAACATGAGCCCAAGAATATTCAGACTCTTGCATCTGATACTTCTGCTCCTTACAACATCAACAGGTAATAAAGAAAAAAAGAATATGTTCCTTC TCCTTCTTTGGCATCTACTCCATTCCATTAATCCCCAATTTCACTGTCAACCCATAAAACCATTTTACCCCTGATTAATAATGTATACAAATCTAATTAA CAGCATATATCATATAATGAGGTCAATGATAGATTACTAAGATATTCTTACCTTGTTATCTGTCTAGAAAGTAGAAACTATATACAAGCATCATATTTTT GTTTATTGATTATCTCTTCAACAGAATCTATTATGTTATTTGCCAGGGCTGATATTGACTGGTAATCATAGGCGTGCATGCGCAATGTTGTTGCTTCATT TTTAAGAGGTGTACTTTTTGTTGTGTGTTAGTCATGCCTACTCTGTTTAAAGATGAGTTTATCTCTTCTTGCAGGATGTTTATGAACAAGGAGAATGGCA GTGAGAAAATCCCCAATGCCCATGCCCTCCCGATGCTGCCTCCCACGCTTGAGCTGAATCCCAAAGAAAACCCCTTCATGATGCATAAACAGCAATTCCA GTATGAGGAATCCTCAAGGAATGAGTTTGGTTTTGTCACTTCTGATTCCCTACTTAACCCTTCACAGAAAAGCTCTACCTTGCAAACTAGCAGCAGAAGC TTCGGTTCATCGCAAAACCAAACTAACCAAGAAACAGATTCTCAACATTTCCTTAGACATTTCATTGATGACTGGCCTAAAACTCAGTCTAATAGCTCAG GTCTCGCTTGGCCTGAACTTCACATGCAATCAGACAGGACCGAGTTATCAATTTCGGTCCCAATGACTTCCACAGATTTCATGTCATCCACTTCCTCTCC CTCCACCGAGAAGGTCACGCTGTCGCCTCTCCGGTTATCAAAGGCTTTAGACCCAATTCAAATGGGTTTAGGTGTAGGAAATACTCATGCTCTCAGCGAG TCGAACAACAGTAGGGAAGCTAATTGGATTCCAATTACTTGGGACAGTTCAATGGGTGGTCCTCTTGGAGAGGTTCTGAATGTTAGCAATAATAATAATG CAAGTGATCACAGTGCCAAGAACAATTCTTCTTCTGCCCTTAACCTCATGAGTGATGGGTGGGACAATAGTCCCTCCTTAGGGTCTTCTCCTACTGGGGT CTTACAAAAGACAACATTTGGATCTCTATCTAATAGCAGTGCTGGGAGCAGCCCAAGGGCAGAGAAGAAAACCGAAGAAGGAGCTGAAAAAGATACTCTC CATTAATGGATAAACATGTTATTTAAGGTTGCACTTCTCTTTGCTTTTTTATGTATCTGTCTCTCCATTAATCGAGAGGATCCTAACTCGGAAGGAGTCA CTTGTGCAATCATTTCATTGGTTCAACTCTTGGGAATTGAATTGAATTGAAGGAGAAACAAGTTTTTATGTGTTGTCTGTATCTTAAGAGTTCAGTTTTT TATTGCTGCCCCTAATATGGTAATGTATGAATGTTAAAAAACATTGTTCTTATTATAAATTGTTTGTGTAGGTTTTGCTTTTGCTTGACTTTGTTTTGTA TTAATGTCCTTGTGTTCTGTGCACGTTTTGAGAAGTTTGTATGTGGAATTGGTTTATTGAAGTTTTGGTCATGTGGGGACTTCTGTCCAAAAGAGACAAT GTCCCGGTTCAATATAATAACATCAAATAATGTAGAAAAAATAACTTCATGTTTATATTTTTATTTTCCAATAAAAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_150258; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311149
| Blastp | Growth-regulating factor 6 from Oryza sativa with 41.83% of identity |
|---|---|
| Blastx | Growth-regulating factor 1 from Arabidopsis with 88.89% of identity |
| Eggnog | growth-regulating factor(ENOG4111S3M) |
| Kegg | Link to kegg annotations (4333990) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417477.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |