Ll_transcript_309060

• Id Trinity: TRINITY_DN47159_c0_g4_i2
• Name Transcript: Ll_transcript_309060
• Sequence: GTTGAGTTGATAATTTTATACAATTACAATTAAGCTAAATTAAATCACTCAATTCTGAAATTAATGACACAATAAGTTCTCAACTTGATTATTTGGTGAA TTCAATTGACTTTGTATGAGCTTGATTTAGATCTTAAAACCACCATAATCATAATCTCACACCTCTTCAAACTTGAAAGGGACACTTCATCTCTTCCTCC TTTCTTCCAATCCAAATCAAATGCAACCTTCTCTCACCATGTCTTCTATTTTTAGGGTTTCCATTTAACATAAAACAATCCTAATTATCCTCACTCTTCA CAACACCAACTTTCTGATTCACTTCAAATCCACACCTAAACACAAAAAAACACTCTTCTTTGTTGCCACCATGCCAAACCCACTTCAATTTCACATTCCT TAAGTTTGGGGTGCTTTTGTAAATTCTGAAAATCTTGGGGTGCTTTTGAATATTATTTTGTACAATGATTTCTTCTGGGATAAACTTGGTGATGACTGTG ATTGGGTTTGTGGTGAGCACTATGTTCATTGTTTTTATATGCACAAGGCTTATTTGTGCTAGAATTCACTTGAATGCTTCTAGGAGATCCTTTCCTGTAG CTGCAAGATCCAATCTCAGCATAATGGAACGGGGTTGTCATGGTCTTGAACGTGCAGCTGTAGCCAAATTTCCAACAAAGAAGTACAGTGACAAGTTTTT TTCTGATGCAGAAAATACTCAATGCCCGGTCTGCCTCTCTGAGTACCAAGGCGAAGATTTACTGCATATCCTCCCCTATTGCGAACATTCATTCCATGTG ACCTGCATAGACTTATGGCTGCAGCAGAATTCAACTTGTCCTGTATGTCGAATATCGTTGCGTGAATTTCCTGAAAGAAAGCGACTAATGCAACCCATGT TCAGCTTCACTTTGCGACCTCAGCATAGCATGGAATCATTTGACACTGATCATTATCACTGTATGATGACTAATAATGGATTATCATCGAGAACACCGGA CAACAATAGGGCGAACCCGATACAAGAGGATCATTTTCCACCTGAGGGCGGTCTAGCAGTTGCTAGGGACAATATTGCCTGTTTAAGTCAGGGTGGTCTC ATTAAAGATGAAGGAAAGAAGCATGTAGAAAGCCCATCAAATTTCTAGATTTGATTTGTTTCTTGGAAATCTAAGCCTCTTAAGTGTGGTAATTTGAAAT CACAAAATTGTACTGAAATGTATTGGCATGCTGAAAGATAGTTTATTGTATATATAGCAGATAATCTTTCTTTCCCATCATTGGTTCCATTTATTTCTCT TTTACTCAACTCCTACATGAAACTTTTAGTGGGCAAGAACATGTAAATGAGAAAGGAGAACCTTAGCTGAAAGATAGTTTATTGTATA
• Tissue: pods
• Gene name: LI_gene_150306;
• Additional information: details;

Expression of Ll_transcript_309060

FPKM

• PAB: 18.1
• PNAB: 7.8
• PS1: 7.4
• PS2: 6.8
• PS3: 10.2
• PW1: 8.8
• PW2: 11.1
• PW3: 10.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_309060

• Blastp: RING-H2 finger protein ATL32 from Arabidopsis with 36.51% of identity
• Blastx: E3 ubiquitin-protein ligase ATL59 from Arabidopsis with 29.55% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: Link to kegg annotations (AT4G40070)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019429157.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;