| Id Trinity | TRINITY_DN47159_c0_g4_i3 |
|---|---|
| Name Transcript | Ll_transcript_309064 |
| Sequence | GTTGAGTTGATAATTTTATACAATTACAATTAAGCTAAATTAAATCACTCAATTCTGAAATTAATGACACAATAAGTTCTCAACTTGATTATTTGGTGAA TTCAATTGACTTTGTATGAGCTTGATTTAGATCTTAAAACCACCATAATCATAATCTCACACCTCTTCAAACTTGAAAGGGACACTTCATCTCTTCCTCC TTTCTTCCAATCCAAATCAAATGCAACCTTCTCTCACCATGTCTTCTATTTTTAGGGTTTCCATTTAACATAAAACAATCCTAATTATCCTCACTCTTCA CAACACCAACTTTCTGATTCACTTCAAATCCACACCTAAACACAAAAAAACACTCTTCTTTGTTGCCACCATGCCAAACCCACTTCAATTTCACATTCCT TAAGTTTGGGGTGCTTTTGTAAATTCTGAAAATCTTGGGGTGCTTTTGAATATTATTTTGTACAATGATTTCTTCTGGGATAAACTTGGTGATGACTGTG ATTGGGTTTGTGGTGAGCACTATGTTCATTGTTTTTATATGCACAAGGCTTATTTGTGCTAGAATTCACTTGAATGCTTCTAGGAGATCCTTTCCTGTAG CTGCAAGATCCAATCTCAGCATAATGGAACGGGGTTGTCATGGTCTTGAACGTGCAGCTGTAGCCAAATTTCCAACAAAGAAGTACAGTGACAAGTTTTT TTCTGATGCAGAAAATACTCAGTATGTTGATTTCTCTGCTTCTTCATTTTGTTTTCCTAATCTGCCTTTGATGTTAATGGAATTAAAAGGAAAACTTATG ATCAGTGAGATGGAAACCGTGTGTGGAAGTTGTAAAAATTTTCTTGTAAAATACAGTTGATTGTTGAAGACTTGAAGTATAATTTGCACTATAACCTGGT GTAGAGGACCGCCCTTTTTTAAATGTGTTTATTCATGTATAAGGAAAACTGAGAATATTGTTGTCTTTCTCTTGAAAGGTTACACATTTGTTTAGTCGCT GACTATCCTATATGAAGTTTTGTTCCAGTTGCATGGCATTCTTAAAGGCTTCAGGAATTTAGCCTTTTAAATTATTTGGGTCTGAAACTGTGATTAACTG ATTCCAGTTATTATGAATATTATTTTATGGTCATCTCGTGGCATTTTAAATTAAAACACAAATCACCAACCTTGATCTTTTATTTTATATTTTATACTGT CATGTGTTAGGACAGCCCCTAGTGGGCCAGTTTTTATTAGTTAGGCCTTGTTTGTAAAGCTGTTAGAGCTAGTGGATTGGTATAGGCTACTCTTAATTGA GATAGAGAATGTGAAAGTGGTATCATTTGTATTGGAAAGGAAAACGGGTTACGGAGAGAAATTTATGGGTAGGTCTGTATGGTTGGACAGTAATTTGATC TGAAAGGGATAAGCGATCAATAAAAGGTTTAGGCAGTGAGGGTGGCTATGTAAGGTCAATTGTGGTGGTGGTTTCAATGTCGGGAGTTATGCGCGCAGAC CCCTTCTTAGGCAGATTTCAGCCTTTGAAGGCCCAGAACCAATATGAAATGAACCCATATTGATGTTGAAGCGAGCAGCATTGGAAGAGGAATTAGAACA GTTGCAGCTAGAAATTTCACAACCAGTTACAAACCTAGAAAATATCTTGGAACCAGAGACAGAAACCAAGAACGACCCAGTCGTGATGCTTCAGGATACG GGAGATACGATTGAGGTGGAGGAGGAAAATAGTGATGTATCAGTGGGTATCTTTTCTAAACTCATATCAGGTTGAGACGAAGGTCAAAGAAGAGGAATTC CAGAAAAGGCTGGTTACAGTGATAGCCAACCCATCTCAATTCTGGTCAGGTTTTAGTGGAGATATCTGAACCAACTTCAAAGGTTTTGCCATTCAGATGA AAGTGGAAGGCAAGGTTCAAATGTTGCAAGAGGAAGCTGCTCCATTCCATTCTGCAGTTTCTTGTTACAGTAAGGGGCAACAGATTCAATGTGAAGACTG CATCTACTGGTCTACTATCATACCTGCATTACGGTGGAAATGGGACCCTGGGGGAAATTTGTTTTCACTCTCGTGTTTATCACCTTGAGGGCAAGTTGAA TGTTTAGGGGGGGGAGTTGTTAGGAGAAGGCCCTAGTGGGCCAGCTTCTATTAGTTAGGCCTTATTAGTAAAGTTGTTAGAGTTAATTGATTACCCTAGC CTACTATTAATAGAGATTGAGAATGTAAAAGAGGAAGGGGTACCCTTGTATTGGTAAGGGAGGGGAAGTTAGGAAGAGTTCTAGGTTTCTCGAATACCTT GAGTAGAAAGGAATAGAGTTTTGTAATTCTCTGGTGCTGTAATTCTTGTTACCGGCCACTTTTCATATCAATACACATATTTTCCATTCATTCTGGTCCA CTTCTTACACAATGCTAATGATTTATGTTTCAAATCTCTATTTGGTATTGACAGTTTTAACCTTTAACAATTATTCTAAAGTTCAAAGATTTTGTTCTAC TTTCCTAGTTGTGGTAAACTTGTTCTGTTTATTGCTAAAGGCAACCGGAATGGTATTGAAGTTTAGAAATTATACTTGCATCTTCTGTAATGACTTCTCT TTGATCAAGATTTTTGAATCTTTTTCAACACACACATCTTCTTTATACAACCTTCCATATGAATGAAAAATAAAAGACAAGAGGTTACTCGTACTTCAAT GACTAAATGTATGTAAGTATAACTAAAGCAAACCTCATGAGTAATCAGTGGAATGTATTCTTGTTATTTAGTATTTTTGTCCGTCTTGCTCATAAATCAG TGGAAGAGGGATTATTCAAACCTTGTTCATCTTGTCGAAAATTTGGACAATGTCTAAGGAAGAGGTTGAGCTACATTGTTTCTTGTAATTCTTAAAGGAT AAAAAATATGAACTTTTGTTTTTATGATGTCAGGAACTTAATAATGGGGACTAGGAAGTGCTTTAGGTATTGGAGTAACTTTTCATTCAGATGATTATTT CCTCGTGATGAATATTCAATTTTGTTGTATGTGCAGATGCCCGGTCTGCCTCTCTGAGTACCAAGGCGAAGATTTACTGCATATCCTCCCCTATTGCGAA CATTCATTCCATGTGACCTGCATAGACTTATGGCTGCAGCAGAATTCAACTTGTCCTGTATGTCGAATATCGTTGCGTGAATTTCCTGAAAGAAAGCGAC TAATGCAACCCATGTTCAGCTTCACTTTGCGACCTCAGCATAGCATGGAATCATTTGACACTGATCATTATCACTGTATGATGACTAATAATGGATTATC ATCGAGAACACCGGACAACAATAGGGCGAACCCGATACAAGAGGATCATTTTCCACCTGAGGGCGGTCTAGCAGTTGCTAGGGACAATATTGCCTGTTTA AGTCAGGGTGGTCTCATTAAAGATGAAGGAAAGAAGCATGTAGAAAGCCCATCAAATTTCTAGATTTGATTTGTTTCTTGGAAATCTAAGCCTCTTAAGT GTGGTAATTTGAAATCACAAAATTGTACTGAAATGTATTGGCATGCTGAAAGATAGTTTATTGTATATATAGCAGATAATCTTTCTTTCCCATCATTGGT TCCATTTATTTCTCTTTTACTCAACTCCTACATGAAACTTTTAGTGGGCAAGAACATGTAAATGAGAAAGGAGAACCTTAGCTGAAAGATAGTTTATTGT ATA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150306; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309064
| Blastp | - |
|---|---|
| Blastx | RING-H2 finger protein ATL58 from Arabidopsis with 40.96% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019429157.1) |
| Pfam | - |
| Rfam | - |
| GO | - |