Id Trinity | TRINITY_DN47160_c0_g1_i18 |
---|---|
Name Transcript | Ll_transcript_311455 |
Sequence | AGTACAAACCATGTATCACGCAAAAAAGATTTCAATGTCAACCATGGTGCCACATCAATCTCAATGCAGTTCTGAACAACTCGCAAATGTTGCGATTTTG GGTGGATCTGGCGTGAAAAGTGGCGCACCTGCTGAGGAAAGTGGGAAACAACGCTTACGATGGACATCCGATCTTCATGACCATTTTGTGGATGCCATTA CACAGCTTGGTGGACCAGATAGTGGGTATTCGTATTTCTTTTCACTGTTTAGATTTAACACAATTTTTAGCGAAAAAATAAGTCGTTTTTGTAATCTATC ATGATCTTTGACAAACATGTGGTAAAGAGAATGCCTCTTGAGAATGCAACTAATGATGCTTACATACTGCATCAGCATTCAGCAGAGATTGCTTACATGC TAGTAAGTGATACATACATGCTTTTTCGGAATGTAAGAAATGATGCTTAGATAGTGCATACACATGAATTATCATCCGAAATTAATGGTTTAAGCTATGT GTGCTAGTAAGTGATACTTAAATGCTTTCCGGGAATGTAACTAAGTGATGTTTACTTACTGCATTAGCATGAGTTTAGTATTTTAAATTAAATGGCTTTA ATTATGTTGCAAGCCTGGCATGCAGTGCCTACTCTTTGAAGTTATAGGAAGTCAATTGAATTTAAATTTATTTTCAGTGGCTGGTTATTTGAAGTTGATG TAGATTTGTTGCTCGAAAGTGGATGTCTTCCCTTTTCCTTACCCCCTTTTCGTTTTGAGTTTTACTTCTTTAGCCCGATGATCTGCAAAAAAAGTAGCTA ATTTTGTGGATTTTTTTGAATTGTTCATGACAGGAGCAACACCAAAAGGTGTTTTGAGAGTGATGGGTGTACCTGGACTTACTATTTATCATGTCAAAAG CCATTTACAGAAGTATCGCCTTGCAAAGTACTTGCCTGACTCTTCAGCTGATGGTAAATGTGCCTTGTTTCTTTTTCCCTTGCTCCCCCAAAAGGACATT AATTACAAATATAATGATGTTTTGATTTCATATTTTAAATTGAATCTGTGCGAATTCTTCTTTTGACTTTCAGACTCTAAAGATGAGAAAAGGAATTCTG GAGAAAGTGTTTCCGGCGCAGATTCTTCCCCGTGAGTATCTTGTTTTCCTAAGTTGAATATAACTAATTAAATGTATCTTTGAATTTTTATTTTTCCCTT CTTCAGGGGATTTCAAATCAATGACGCTCTAAGAATGCAGATGGAGGTTCAGAAACGTCTTCATGAACAGCTTGAGGTTTGGTGCTTGGCTTTGCTCTGT TTCGCAATTTCTGAAATAAAATACTATTTAGGCCATAAACATTCTTAATTATCTGTCTTCATGTATCTAGGCAAGTGATTTAGAAATAGGAGTATAATTA AAATGCGGATTTTCTATTAATGCATCTATTATCATTTCCTTAAAAGTTATGTAACTATGTAAGTTCTGTTATAGCTATACCATATGGATGGCTTTCTTTC TGTTAATAGCTGGCAACCAGAATATGTGATGTGTATCTTAAAGAGGAACAACTGAATAGGCCAATCATGTGGACGATCGAAGTGATAAGTTTAATTTACA ACAGAAACTTCAAATGTTATTATAGTAGTTTGAAGAAATGGGTCTAATTACTAATGATTTCAAATTTTATTTCATTTGTTTTCATCATTTACCTAATTTT CCATACAGTGGGTAAAGTAGAAATGTAGTTCTGGAATTCTTTGAAATGTATATGCCTTGTTTGATCTGTGAGTCCTGCATCTTTTGATAGCTGCTAAATT CATCATTTAGCCTTCTAATGAAGAACTTGCATGAAATCGGATAACTGCTGCGTTTTGGATTTCCGAGTATCGTGCTTAGTGAGATGTCCTACATTGGTTG TAAGCATTTCTGCTAATGATAAAAGCCTTTCATCTGCTACAATGATATTCCAGGTTCAACAGCAGTTGCAAATGAGAATAGAAGCACAAGGTAAATACTT GCAGAAGATCATAGAAGAACAACAGAAGTTAGGTAGTACCTTGACAACCACGGAAGCACCACCATTGCCCCACGATACACAAAATAATACTCGGTCAAAG CCTTCTGGAAACAGGGATGCACTTGCAGGTACTTTATCTCAGCTGAAAAAACAGAAAACTGATGATGGTTCAAAGGATGGCTTCACTGCTTCACGGGTGC CTACAAATAGTACACAGACGACTGGTTGTAGTGCTGGTAACATGGATCCATACTTGCATGAAGGTGATGCTGGGCCTGGATTTGATTTGGAGACGGAAAA CAGTGACAATAAGGAGAGTCAAGAGTAAGAACTAGGTTCCAGTTGTAGGTAAAAATGGGTCTCACTGTAATGTCTAGTCTATCTTTCTGGTAGAAAATAC AACCATGCTTGTCTGAATTATTTTTCATGCAACCCATTTGTATATCCATGTAGCTGATCTTACTCAGCGAGATAAAAGTTTGGTTGTTGTTGTTGTTCAA AGTTGAGGATATTTATCAGACATTTTTTCTATAAATCTGAACCCTTTCTTTGGTTCATAACCTTCTCATTATTTTTCTCTACAATTGTTTTTAAAGGTGG GGAGAAGCAGATAAAGGAAGGAGCATATATATGGCAAAAATGAGGATGGGGAGATGTTTTAAACTGGAAAATAATGGCATACCCATTAAAATTAGTCATT TAGATCAATATAATTATCAAACATAAAAAGTAGGAATGTGAGGTGAATGTACATCAACTCGCTAATAATAATTTTAGGCTATAGATGAGACTATCGGGCT TAATATGTTTTTTTATCTAGATCAAAGTGTAGTATAATAAGGTAAATAAGTTTTTATATATATATATATAATAAAGTTATACTTATTGCTTATGCTTGGT TGTGCAGGAAGCAACTTTTCAAATGGTGCATTTTGGCTTATGCTTGACCGAGGTTTGCTTGATCCTGGCCCAACATGCATAGGCTTCTGATGCAGGCGTA TAGACTTGGCGCATGGGCACAGGCACATGACCTTGGAACATTGGCGCAGGAACATAGGCGCATGGACATTGGCGCAGGAACATGGGCGCAGGCGCATGGA AAATGGCGCATGGCCTTGGCGCATACAATGGCACATGGCCTTGGCTCGTTGGTGCAGGCGCATGGACTTGGCACATGGCCTTGGCGCATGCAATGGTGTA TGGCCTTGGCCCGTTGGTGCAGGCGCATGGCCTTGGCGCATGAGATTGGCGCATTCTTTTTCCTAGTTCGTTCTCCTTGGGCAGCCATATGGAACATTCT AGAAGGATGAATTGTATCATAGCACTTTTAATTAACATGTGCTAAATATTTAGTTGGTTAGCTTGTTAAGTTAGTTAAGCTTCTATTTTCGCACATGGTT AAATCGCCTCTATGCCAAGCAACTACTTCCTACTTAGTTTAAATATGGGTTGCCTTGTAAACTTTTAGCTCATCAATGAAAACAGAGATTATTTCATTCT TCAATCATCTTTACACGATTTCTATTGTGGTATGAGAG BLAST |
Tissue | pods |
Gene name | LI_gene_150314; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311455
Blastp | Myb family transcription factor PHL7 from Arabidopsis with 65.79% of identity |
---|---|
Blastx | Myb family transcription factor PHL7 from Arabidopsis with 43.92% of identity |
Eggnog | Myb-like DNA-binding domain(ENOG4111GBR) |
Kegg | Link to kegg annotations (AT2G01060) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457151.1) |
Pfam | MYB-CC type transfactor, LHEQLE motif (PF14379.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |