| Id Trinity | TRINITY_DN47162_c3_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_309971 |
| Sequence | AGCTCCGTCAATGGCGAAGAAGAAAGCGATGATAAACAACAACAACAACAACAACAACAGCAGCTAATTAGATTCCCTTCCCGTAACGCTTCCTCCAAAT ACGATTTCGTGAAGGTTAAGGTCTGGTTGGGTGATAATGCTGATCACTACTACGTTCTTTCCAGATTTCTCCTCAGTCGAATGCTCACCGTCACCAAGAT TCCAAACCATGTTGCTATTAAGATTGCCCTTGAACTCAAGAAGCTCCTCACTGACAATAGTCTTCTTGATGTCTCTCAGTCCGATTTGGAAGCCAATCTA TTTAAGCTTATGGAGCGGCGGGGATATGCAGAAGAATACATAAACCGTTATAAGATGATGACAAGATTTCACCACCAAAGAGTTCCATTAGTAATCCTTG TATGTGGAACTGCTTGTGTTGGGAAGTCTACTATTGCCACTCAGCTTGCACAGAGGCTAAATTTGCCAAATGTCTTGCAGACAGATATGGTTTATGAATT GCTGCGCACATCAACAGATGCACCATTGGTGTCAACTCCTATATGGGCTCGAGACTTCAGTTCATCAGAGGAGTTAATAACTGAATTTTGCAGAGAATGC AGGGTTGTTCGCAAAGGTTTGGCTGGTGATTTGAAAAAGGCAATGAAGGATGGAAAGCCAATTATAATTGAGGGAATACATTTGGATCCAAGCATTTATT TAGTGGATGATGAGCATAAATCACCTTCTGGTGTACATTCAGAAAATAAAGAGATAAATCCAGCATCGCTGGCATTGGATGATAATGCTACAGTTGAAAT GAAAAATACTAACGTGGGTAATGGTGATGAGAGTAATGGAGGTTCCAGTATTCTGAGCTCCAACGGGGGAAAATCTGCTCACCAGGTTGATGCAGTATCG AGTTCCATGGCATCAATGGGCATAACTGAAAGCATATCTGCTGGTGCTTCCCTTGTAGAACTGGAGACAGACAAAACTACTATTAGTAAGAAATCAGGTC CCAAACCAATCATTGTGCCTATTGTTCTGAAGATGGCTGAATTTGATCATAAGGCATTACTTGAGGAATGGATCTTCAGCCGTACATTTAAGGATAAATG CCTAGACCAGGCTAATGATAAGCTTATAGCCAACTTGAAAACCATACAGGATTACCTGTGCTCATTCACATCACAGGGGTTGACTGTGGTCAATGTATCA GCAACAACATTTCCTCAAACGCTGGATTGGCTGCATAATCACCTTCTTCAGTGCATCGAGCAAGGTACTTCATCAGGGTCATGTGAAAATGTTACACAAG AATCTGCAGCATAGTCCTCTTATAATGATTGCAATTATGTCAGGTATGGAATCCACAAGCATTAAGTTTTACTTTATGTTTTTGTCTTCTATAAGGGTAT GTTTAGCTTGGAAGTAAAAGGAGAACTTTTAATCATTCAAGTATATTTGGTTGATAATTAAAAAACGGATGAAGATTTCTGCAGCATCGGTTAACCCATA TATTGATCTCACCCTGTTGGAAATAGATCTTGGTTGCTATTGGTTTTTGCATGTATGATCATTTCCATCATAGAAGCTTTTGATTTTTTTTAGTCAAATG AATACTTACTTGAAAATGCATGGGACTTGATAAGTGTTAGACACTGGTATGCATGGGAGGGGTGTTTAAGACCCAAATTCCTTGTAATTTTTTGTTATAT CTTGTCAAATTTCTTTCTAGTTCCACGTTTCATGTTTAAATGCTGCATACATGATAAATTAACCATTTATGTCAGTGTATAAAACTCATACACTGTCAGT GCATATATCTTTTATCCTTTCCTTTTTACTAAACGGTGTTGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150331; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309971
| Blastp | 2-phosphoglycerate kinase from Pyrococcus with 32.31% of identity |
|---|---|
| Blastx | 2-phosphoglycerate kinase from Pyrococcus with 33.76% of identity |
| Eggnog | 2-Phosphoglycerate kinase(COG2074) |
| Kegg | Link to kegg annotations (PH0149) |
| CantataDB | Link to cantataDB annotations (CNT0002564) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019412852.1) |
| Pfam | AAA domain (PF13238.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |