Ll_transcript_309974

• Id Trinity: TRINITY_DN47162_c3_g1_i5
• Name Transcript: Ll_transcript_309974
• Sequence: AGCTCCGTCAATGGCGAAGAAGAAAGCGATGATAAACAACAACAACAACAACAACAACAGCAGCTAATTAGATTCCCTTCCCGTAACGCTTCCTCCAAAT ACGATTTCGTGAAGGTTAAGGTCTGGTTGGGTGATAATGCTGATCACTACTACGTTCTTTCCAGATTTCTCCTCAGTCGAATGCTCACCGTCACCAAGAT TCCAAACCATGTTGCTATTAAGATTGCCCTTGAACTCAAGAAGCTCCTCACTGACAATAGTCTTCTTGATGTCTCTCAGTCCGATTTGGAAGCCAATCTA TTTAAGCTTATGGAGCGGCGGGGATATGCAGAAGAATACATAAACCGTTATAAGATGATGACAAGATTTCACCACCAAAGAGTTCCATTAGTAATCCTTG TATGTGGAACTGCTTGTGTTGGGAAGTCTACTATTGCCACTCAGCTTGCACAGAGGCTAAATTTGCCAAATGTCTTGCAGACAGATATGGTTTATGAATT GCTGCGCACATCAACAGATGCACCATTGGTGTCAACTCCTATATGGGCTCGAGACTTCAGTTCATCAGAGGAGTTAATAACTGAATTTTGCAGAGAATGC AGGGTTGTTCGCAAAGGTTTGGCTGGTGATTTGAAAAAGGCAATGAAGGATGGAAAGCCAATTATAATTGAGGGAATACATTTGGATCCAAGCATTTATT TAGTGGATGATGAGCATAAATCACCTTCTGGTGTACATTCAGAAAATAAAGAGATAAATCCAGCATCGCTGGCATTGGATGATAATGCTACAGTTGAAAT GAAAAATACTAACGTGGGTAATGGTGATGAGAGTAATGGAGGTTCCAGTATTCTGAGCTCCAACGGGGGAAAATCTGCTCACCAGGTTGATGCAGTATCG AGTTCCATGGCATCAATGGGCATAACTGAAAGCATATCTGCTGGTGCTTCCCTTGTAGAACTGGAGACAGACAAAACTACTATTAGTAAGAAATCAGGTC CCAAACCAATCATTGTGCCTATTGTTCTGAAGATGGCTGAATTTGATCATAAGGCATTACTTGAGGAATGGATCTTCAGCCGTACATTTAAGGATAAATG CCTAGACCAGGCTAATGATAAGCTTATAGCCAACTTGAAAACCATACAGGATTACCTGTGCTCATTCACATCACAGGGGTTGACTGTGGTCAATGTATCA GCAACAACATTTCCTCAAACGCTGGATTGGCTGCATAATCACCTTCTTCAGTGCATCGAGCAAGGTACTTCATCAGGGTCATGTGAAAATGTTACACAAG AATCTGCAGCATAGTCCTCTTATAATGATTGCAATTATGTCAGTAGGGTCCTTCCCTTCCCTTCCCAATAATTCAGCAATGATTTCTGGATTCAACTTGA CTAAGTGGATGATGTTGGAGAATAAATAATCAGAAATGAAAAGGACAAGTAGGATGCTCATTTAAGATCTAAATAAGTAGATGATGTCTCATTATGTGAG GAAAAGATCATTGCTTGGATGAAGAAAGCAGCAGGCACCTATCAAAGTTGTGATTATATTGCATTTAGCAATGTTAGACATGAATAAACAAGGCATGTCT GTCATATTAACTTGATATTTGAAATGATGTTTAAACATGTTAAAGTATTGTATTTCACAATCATTCTTAATGTCGCTATAAAATCAGCAAAAGAGAAGGT CTAATTCATCATTTCTCTCTCCGGAGAAAAAGCATAGATGTCCCATAAAAACATTAAGTAGTTGTTTTATGAGCACATATCTGTATTAGAGTGTAGTGAA TTCTTTTTAACACCACCCCTTTTTTATGTATGAACGAAAGAGGAGAGAGAAAGAAGTGATTGATGATTTGTTATGGAAGGAATAGAGATATAAAAGAAAG ATAAAATGTTATTGAGGTAAAAGAGAAAAATTGTGAGAATATAAAGTTGCTTTTCGATCAGTAAAGTTAAAACTCTCACTCACCTCGGAATTAGTACAGC ACTTTAAAGCCTGAAGAATA
• Tissue: pods
• Gene name: LI_gene_150331;
• Additional information: details;

Expression of Ll_transcript_309974

FPKM

• PAB: 6.2
• PNAB: 16.9
• PS1: 19.7
• PS2: 14.3
• PS3: 20.9
• PW1: 11.4
• PW2: 11.6
• PW3: 8.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_309974

• Blastp: 2-phosphoglycerate kinase from Pyrococcus with 32.31% of identity
• Blastx: 2-phosphoglycerate kinase from Pyrococcus with 33.76% of identity
• Eggnog: 2-Phosphoglycerate kinase(COG2074)
• Kegg: Link to kegg annotations (PH0149)
• CantataDB: Link to cantataDB annotations (CNT0002564)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019412852.1)
• Pfam: AAA domain (PF13238.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;