| Id Trinity | TRINITY_DN47163_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_311189 |
| Sequence | ATTACCGCTATCTCATTTTTAACCCTTCAAATTTATTCAACTTCATCATCCCCACACTAAGAAATTTCTTCTCCACAATGGATTTATCGAAAACCGTTGA TCTTGCTCGAAATTTCGCAGTTATGGTTCGAGTTCGTGGCCCTGATCCAAAAGGCATGAAGATGAGAAGACACGCTTTTCATCAATACCGGTTTTGTTAC TTCTCCCACTCCATATTCATAATCTTGCTTCTCTTGTTTCAAAGTTTTAATTTTTCATTCATGGGTATGTTTAGTTCTGGAGAAACAACTCTTTCAGCTT CTGGGATGCTTGTGCCTGATACACTTTCTGATACCCAAAGTGCTAAGCTTCTATACGATGATAAATCTGATGGTAGGGTATTGGTTTTAACTGTTGCATC GCTTGTGGAACCCTTTTTGTCCCCTCAACATAGACACAATATTCCTCAGGATAGACCTAAGTTGATTCCTGGTGTTCGGATTGATATTATGACCGAGAAA ACCAACGAAAATTCCAGTCAAGGAACCCCTTCTTGGCTTGGGGCGCAGCTTTTGTCACTAGTTGACATTCCTGCTTCAGCCCTTTGTCTTCAGTCTCTAA TTGAAGCATCTTCGGGCTCACCAGAGCATGAATGGGAGGTTGGTTGGTCTTTGGCATCAAACAGTAATGATAATAAACCTTCTAAAGATTTTTTTCGAAC TCAGGTTAGCCCTGTTTTCCTTTATGAATGCACTCTCTCCCTTAGTTAAAAATTAGTTATAGTTTACAAAATTTGTATATTAAAAACATCCCAGTTCAAT TATGAGATGGGAAGTATGATTCAAATGCCTTAAGAAAAGTGCACTTTGCATTCACAAATTTGATAATATGACTTGTATTTCACTGTGTCATGTTTGTCTA AATAAACTTGTTAGATCTGGAATTATATTGTAGCATGTCTGTCTGTCGCTTCTGGGAAAAGCACTCAATTAAAACACGTGGAAAGTTTTGCTCGTTGGTC TGCAAGCCTGAAAGCACCACAATCTGAGCTATTAATTTATTACATGGGATTAAGTAATGATGATAATCCTTCTATGTTTTTAGGTACTGGCTGAATTTTT TTGGAACATTCATCTCCACAGATGGATCACCCAGTTAAGATTAGTGGCTTATAAGAGTTGATCAATGTCTCTTGAGGCATCTTGTAAATTCTATTTGTAT ATGCTCAAAATTTAGCTTTTAACATTGTTGTGGGAAGGAAGCTGAAGCTGAGTTTCATAAAAATAGTTTGCACATTGCTTGCCAAAAGATGAAATTTTGG GGAAAAAGTGAGCATAGATGGCTAGTACTATCAAGTTTTGATCAGTCACAACTCAGGCCCTAGCTGTATTGCTTTCCTATATTTTTTCTCCTTCATAACC CCTCTAAAGTGCTTGGTAAATTATTTAAGTTTATATATTTTAATGTAGATTATGATAAATATGTCTAATAGACATAATGTTTTTGGATGAACATTAGCTT ATATTAATCATGTAATTTTTTTAGATCTGACTAGATGTAATAATGTTTCACCTCAGTTGTTGTTCTGGATATATTTGTATATCTTTTGTAAAAAAATATT GATGCAACTGAAAATATTAATCTGTTCATTGATTAATGGAGTTGCACTTCATGTGAAAAATGGCTTATGTACACTTTTGGTACACTTGGTAGAACTTATT AGAGTTTCATTTTTCTTCTTGTGTATAACCTGCTTTTGGGAATACATTCCTGTGATCATGATGCACAAAACTATAAAAGAAACTCAATCTTTTGCATAGA ACATGATAAATCTTCTGTGAAATGCAGGGAAGATTGGAAGTGGGAGAATCTGGCAGTGCGAGTCTTGTGTGCAAATCATTGACTAGAATGGCCATTCTTA GTGTTTCCTTATCTCTCAAGGACGTGGTGGGTAGTACTGTATCTTCCATTAACAAAAGGGGTGATTCTCTTCTGGCAGTTGGATCTCCTTTTGGGGTCCT GTCACCTACACACTTCTTTAACAGTATATCAGTAGGGCGCATTGCAAACTGCTATCCGCCATATTCATCAGATATATCATTGCTGATGGCTGACATACGC AGTCTTCCTGGAATGGAAGGTAGTCCAGTTTTCAGCGAGGATGCATGTCTTACTGGTATCATGATCAGACCATTGAGGCAGAAGACAAGTGGGGCCGAAA TCCAGTCTTTGGTAACAGCTGGTGATTCCATGGGATGCCATTGTGGGTGCTTCCAGTGGCTTGCTGCAGAAGTTGCCTCAGAACGAGCATTTAGATTTTA ATGGCTCCTCACTATTACCAACTGAGAAAGCAATGGCTTCTATCTGTCTTGTTACGATTGGCGACGGTGTATGGGCATCTGGTGTTTTGCTCAACAGTCA AGGTCTCATACTTACAAATGCCCATCTCTTGGAACCTTGGAGATTTGGGAAAACACATCTAAGTGGTGGAGGATATGGAACCAACTCAGAAAAATTTCCT TTCAAGTTGGAGGGAGCCACAGATCTTAGGAATGGAATTGCGAGCATTCAAAAGAGTCAAACTTTGCCGTCGAAAGTGGGGACTGTTTATTCGTTCACTG CTGATACTTACAACAACTATAGAAACATACGTGTACGTCTTGATCATGTTAATCCTTCGGTATGGTGTGGTGCTAGAGTAGTGTATATCTGTAAAGGACC ATGGGATGTTGCCTTACTGCAGCTTGAATCTGTTCCCGAGAAGCTTTTGCCTGTTGAAATTAATTTTTCCAGGCCATCCACAGGATCAAAGACACATGTC ATTGGCCATGGATTATTTGGCCCGAAATGTGGATTCTTCCCATCCGTTTGCTCTGGTGTGGTAGCAAAAGTGGTTGAAGCAAAGACTCCCCAATCTTATC AATCAATTCAACCTGAGCTCAAGTACATGCATGAGTTCTTCCCAGCAATGCTTGAAACAACAGCTGCTGTTCATCCTGGTGCTAGTGGTGGTGCTGTTAT CAATTCGGACGGACACATGATTGGCCTAGTAACAAGGTAATGCCAATGAATTCATCTACAAGATATTCAACCTATGGTATTCATTCTTCAGCTAACATTA TGTTCATTATTACTATACTGCAAAATGCGAGTTAGTTCAATTTGTAGACATTTGGCACACTGGTTTTATAATTATGGAATTGGAATGTAAGTGGGGTATC TAGTATTTATGTGATTATGCCCATCCACATTGGATTGCCTCATTTGCCTGCAATATATTGTTCTCAGGCAGCCTATAATCTGCAACTTAAATTTTGACCT GATCTTGCTTCATTCATGCTTTGAATTGTTTTGGTGGAAATCTTTAGCTTTCGCCCTTACTGTCACTGCTGTATGATGCTGATTTTGTTGACCCTATTTA CTCACATGAGGCCAGCCTGCACTGGTTGGTCCTAATTTTTTCTGTGTAACACACAAGCTTTTGTGATTTTTTATTCTTTTTATCGGTCCCGACTGGTTGT AGATTATACTATCATATTTGATTAGATAATGTTTTTGTCACAGCAATGCAAGGCATGGTGGTGGAACGATAATACCGCATCTTAATTTTAGCATTCCGTC AGCAGCTCTGCTCCCCGTCTTCAAGTTCTCAAAAGACATGAAGAATTTCTCACTTTTACGGATTTTAGACGAACCGGATGAATACATTTCATCCGTATGG GCATTGATGCGACCATC BLAST |
| Tissue | pods |
| Gene name | LI_gene_150332; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311189
| Blastp | Glyoxysomal processing protease, glyoxysomal from Arabidopsis with 56.5% of identity |
|---|---|
| Blastx | Glyoxysomal processing protease, glyoxysomal from Arabidopsis with 52.68% of identity |
| Eggnog | Serine protease(COG0265) |
| Kegg | Link to kegg annotations (AT1G28320) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419712.1) |
| Pfam | Trypsin (PF00089.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |