Id Trinity | TRINITY_DN47163_c0_g1_i6 |
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Name Transcript | Ll_transcript_311190 |
Sequence | ATTACCGCTATCTCATTTTTAACCCTTCAAATTTATTCAACTTCATCATCCCCACACTAAGAAATTTCTTCTCCACAATGGATTTATCGAAAACCGTTGA TCTTGCTCGAAATTTCGCAGTTATGGTTCGAGTTCGTGGCCCTGATCCAAAAGGCATGAAGATGAGAAGACACGCTTTTCATCAATACCGTTCTGGAGAA ACAACTCTTTCAGCTTCTGGGATGCTTGTGCCTGATACACTTTCTGATACCCAAAGTGCTAAGCTTCTATACGATGATAAATCTGATGGTAGGGTATTGG TTTTAACTGTTGCATCGCTTGTGGAACCCTTTTTGTCCCCTCAACATAGACACAATATTCCTCAGGATAGACCTAAGTTGATTCCTGGTGTTCGGATTGA TATTATGACCGAGAAAACCAACGAAAATTCCAGTCAAGGAACCCCTTCTTGGCTTGGGGCGCAGCTTTTGTCACTAGTTGACATTCCTGCTTCAGCCCTT TGTCTTCAGTCTCTAATTGAAGCATCTTCGGGCTCACCAGAGCATGAATGGGAGGTTGGTTGGTCTTTGGCATCAAACAGTAATGATAATAAACCTTCTA AAGATTTTTTTCGAACTCAGGTTAGCCCTGTTTTCCTTTATGAATGCACTCTCTCCCTTAGTTAAAAATTAGTTATAGTTTACAAAATTTGTATATTAAA AACATCCCAGTTCAATTATGAGATGGGAAGTATGATTCAAATGCCTTAAGAAAAGTGCACTTTGCATTCACAAATTTGATAATATGACTTGTATTTCACT GTGTCATGTTTGTCTAAATAAACTTGTTAGATCTGGAATTATATTGTAGCATGTCTGTCTGTCGCTTCTGGGAAAAGCACTCAATTAAAACACGTGGAAA GTTTTGCTCGTTGGTCTGCAAGCCTGAAAGCACCACAATCTGAGCTATTAATTTATTACATGGGATTAAGTAATGATGATAATCCTTCTATGTTTTTAGG TACTGGCTGAATTTTTTTGGAACATTCATCTCCACAGATGGATCACCCAGTTAAGATTAGTGGCTTATAAGAGTTGATCAATGTCTCTTGAGGCATCTTG TAAATTCTATTTGTATATGCTCAAAATTTAGCTTTTAACATTGTTGTGGGAAGGAAGCTGAAGCTGAGTTTCATAAAAATAGTTTGCACATTGCTTGCCA AAAGATGAAATTTTGGGGAAAAAGTGAGCATAGATGGCTAGTACTATCAAGTTTTGATCAGTCACAACTCAGGCCCTAGCTGTATTGCTTTCCTATATTT TTTCTCCTTCATAACCCCTCTAAAGTGCTTGGTAAATTATTTAAGTTTATATATTTTAATGTAGATTATGATAAATATGTCTAATAGACATAATGTTTTT GGATGAACATTAGCTTATATTAATCATGTAATTTTTTTAGATCTGACTAGATGTAATAATGTTTCACCTCAGTTGTTGTTCTGGATATATTTGTATATCT TTTGTAAAAAAATATTGATGCAACTGAAAATATTAATCTGTTCATTGATTAATGGAGTTGCACTTCATGTGAAAAATGGCTTATGTACACTTTTGGTACA CTTGGTAGAACTTATTAGAGTTTCATTTTTCTTCTTGTGTATAACCTGCTTTTGGGAATACATTCCTGTGATCATGATGCACAAAACTATAAAAGAAACT CAATCTTTTGCATAGAACATGATAAATCTTCTGTGAAATGCAGGGAAGATTGGAAGTGGGAGAATCTGGCAGTGCGAGTCTTGTGTGCAAATCATTGACT AGAATGGCCATTCTTAGTGTTTCCTTATCTCTCAAGGACGTGGTGGGTAGTACTGTATCTTCCATTAACAAAAGGGGTGATTCTCTTCTGGCAGTTGGAT CTCCTTTTGGGGTCCTGTCACCTACACACTTCTTTAACAGTATATCAGTAGGGCGCATTGCAAACTGCTATCCGCCATATTCATCAGATATATCATTGCT GATGGCTGACATACGCAGTCTTCCTGGAATGGAAGGTAGTCCAGTTTTCAGCGAGGATGCATGTCTTACTGGTATCATGATCAGACCATTGAGGCAGAAG ACAAGTGGGGCCGAAATCCAGCTGGTGATTCCATGGGATGCCATTGTGGGTGCTTCCAGTGGCTTGCTGCAGAAGTTGCCTCAGAACGAGCATTTAGATT TTAATGGCTCCTCACTATTACCAACTGAGAAAGCAATGGCTTCTATCTGTCTTGTTACGATTGGCGACGGTGTATGGGCATCTGGTGTTTTGCTCAACAG TCAAGGTCTCATACTTACAAATGCCCATCTCTTGGAACCTTGGAGATTTGGGAAAACACATCTAAGTGGTGGAGGATATGGAACCAACTCAGAAAAATTT CCTTTCAAGTTGGAGGGAGCCACAGATCTTAGGAATGGAATTGCGAGCATTCAAAAGAGTCAAACTTTGCCGTCGAAAGTGGGGACTGTTTATTCGTTCA CTGCTGATACTTACAACAACTATAGAAACATACGTGTACGTCTTGATCATGTTAATCCTTCGGTATGGTGTGGTGCTAGAGTAGTGTATATCTGTAAAGG ACCATGGGATGTTGCCTTACTGCAGCTTGAATCTGTTCCCGAGAAGCTTTTGCCTGTTGAAATTAATTTTTCCAGGCCATCCACAGGATCAAAGACACAT GTCATTGGCCATGGATTATTTGGCCCGAAATGTGGTACGTTCTTGCTGATGCCATATTATAGTAGATATGATAGTTTATTGCTGGGGTGATCAGTGTGAG ACATGTCATGTATTGTATACTTGTATTGCATTCTATTTATTTTTATAAAGAACGATTCATTTACCATGGCTTCTCTTTCTATTTCCTTTGTTTAACCTTG AAAGTCGTCTATTTTCATTAGGATTCTTCCCATCCGTTTGCTCTGGTGTGGTAGCAAAAGTGGTTGAAGCAAAGACTCCCCAATCTTATCAATCAATTCA ACCTGAGCTCAAG BLAST |
Tissue | pods |
Gene name | LI_gene_150332; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311190
Blastp | Glyoxysomal processing protease, glyoxysomal from Arabidopsis with 50.28% of identity |
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Blastx | Glyoxysomal processing protease, glyoxysomal from Arabidopsis with 50.28% of identity |
Eggnog | Serine protease(COG0265) |
Kegg | Link to kegg annotations (AT1G28320) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419712.1) |
Pfam | Trypsin-like peptidase domain (PF13365.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |