Id Trinity | TRINITY_DN47165_c8_g1_i7 |
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Name Transcript | Ll_transcript_310829 |
Sequence | GATACTTTTGGCGAGGAGTTGAAAAAAAGAGAAAGGAGTGAAACGATGAGCTTCAATCTCTTCACCAAAGTTTCACGACAGAACCAATCGAGATTTTCAT TTCTACTTTCACGTTCATTTTCTCAACGATCTGAAAGTAGTAGACATTCATTTGGGATTGCGTTCGATATCGACGGTGTTATTTTGCTCGGAAACACTCC CGTCGGTGGTTCTCCGTCAGCGTTATCAAGATTATACGACGGCGCTGGTAGTATATATGAATTTTCGCTATTTACTATTATGGAATGATTAATTTGTTTG TTTTTGTTTATGACTCAGGTAGAATCAGAATTCCTTACGTTTTTCTTACCAATGGTGGTGGTTTTCCTGAAGCTAAAAGAGCTTTTGAGCTGAGTCAACT CTTGGGTATTAACGTCTCAGCTTCACAGGTTTTACAGGGTCATTCACCATTTAAACAATTGGTCAATAGATTTGAGAATGAATTCATTGTTGCTGTGGGA AAAGGGCAACCTGCTGCAGTGATGTCTGAATATGGTTTTAAAAATGTTCTTTCAATTGATGAATATGCATCACTGTTTGAAAATATTGATCCACTGGCAC CATACAAGAAATGGACAACCAAATTGGCTGCTGTTCAGAATGCAGAGTTTAATGAGGGCGCTCCAAGGAATGATGTGTTCTCTGAAAGGGTTAAAGCAGC ATTCGTAGTTAGTGATCCTGTTGATTGGAGCAGGGACATACAGGTTCTTTGTGACATCTTAAAAACTGGAGGCCTTCCTGGAAGAAATGTTGGACCACAA CCACATCTGTATTTTGCCAATGATGACCTTGAATACCAGGTTGGTTGATGTTTTCTGTGGGTAATTTCTTCAGGAAGATAGAGAGATTACATGGAATCCT TTTAAAATGCCATATTACTATACTTACTGACAAGGTCCCAAAAAAGCTAGACCGCTTTTCCTTCTGAACGTCTGGGCTTGGGAGCTTTCAGGATTGCATT GGAATCCATCTTCAACAAGATTCACCATCATCCCCTGGAGTATACATCTTTTGGTAAACCACATCCATCTGTTTTCAGGAATGCTGAAACTGTGTTACAA CAGCTTGTGCCACAGATTCATGATGATCCTCACAATAATGCTCAAAATTTTAAAACACTTTATATGATTGGAGATAATCCTGTAGTTGATATCAGAGGTG CAAGACAGACTGGGCATCCTTGGTTTTCGATTCTCACGAGAACTGGGGTTTTCAAGGGGAAGGGAAATCATGACCAATTTCCAGCAGACCTGGTAATTCT GTTTACATTCCTCTAGAAAAGTGTCATACACTCATACCTCTTTCCTCTCTTTTTTTAATTTCTTTGAAATATGGCTGTTATGGATAGTTGGAGGCATAAG ATTGAGAAACACTATATATCTTCCAATAGCAGATTGGGAACTAGTAGTATCCTGATCAAAACTAAAATTGGTTAACAATTCGAGTCAAACAGAAAGTAAG GGTTGTACAATACTACAATGTTTTCATTTTGGTTTTGGGGCTTTTCACCTTTTGAAAATTTGATGGAAGACTAATCATTATGTCACACTTACATTTAGCC ACCATAGCCATGAAAACAACTTACATCACAGTCTGCATTGAATTGTCCAAAAAGCATTGTCTGAAATTTATGGAGGAATTATGATTAAGGCAACACCACC AGTAACTTGTTAAACTCAGTGTGTACTTGGTTATATCTAAAACATGCAACTTTGTGTAAAATGCTTTAGTGGTATTATGAACAACTTCGTTTCCGCAGGT TGTTGACACTGTAGAAGAGGCTGTGGACTACATCTTGACAAAGGAATGTGCTTCATAGGTCTCCTCGGCTCAGATTCTTTCTGCTAAGGGCTTTAAAAAG ATGAACTTTGAAAGCTAAAAGGTGATTCTTTTATCAATTGAAGGGTGTAATAATTTATGGTCAAATCCTCCTATTCATTTGAAGCATAAGTTGCATAATG ATACACTTGATGAAAATTGAATTTGTTTTTTTGTTCTTCCAATTTCCTCATGTTTGGCTGCATTATTTATTGACTAAAAGCTTGTAGTTGTGGTACTTGG TAGGCTTCTTAAAGCCTCACTACACTTTCTTGATCTCATAGTTTCATTTCAAGATTGGGCATCCTTG BLAST |
Tissue | pods |
Gene name | LI_gene_150367; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310829
Blastp | Uncharacterized protein YKR070W from Saccharomyces with 33.52% of identity |
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Blastx | Uncharacterized protein YKR070W from Saccharomyces with 28.61% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (YKR070W) |
CantataDB | Link to cantataDB annotations (CNT0002221) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447918.1) |
Pfam | Haloacid dehalogenase-like hydrolase (PF13344.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |