| Id Trinity | TRINITY_DN47173_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_309180 |
| Sequence | TCATAGTTCAGACACAGTAATAGCTATCTCTATATTCTCTCTCATATTCATCTCCATTTGCTTCAAATCACAGGTTTCTCGCTTTTTCACCATTCATTTC AACGTTCATCTCTTTCCTCATTCATTCATCATTCAATCTACAACCACAACTATCTAATCGGATCCAACATAACCGAACGTGGATCTAGGAATAGAACTAA GCTTCGGTGATTCACTTTTCTATTTTTAGAAAGTTCTGTTAACTATAACGCTAACCCTAACGGGTTTCTACTTTTAGAAGTTCCATTCACCGAATCAGCT TCAGTTGTTGAGGATGGCTCCGAGTACGATTCGAAAGGCGATTGGAGCGGTGAAGGACCAAACGAGTATCGGAATTGCGAAGGTGGCGAGTAATTTGGCA CCGGAGTTGGAGGTTGCGGTGGTGAAGGCGACTAGTCACGACGATGACCCGGCGAGTGAGAAGTACGTACGGGAGATATTGAATTTGATGTGTTACTCTC GTGGCTATGTTCATGCGTGCGTCTCCGCGGTGTCGAAGCGATTGGCGAAGACGCGCGATTGGATTGTGGCTTTGAAGGCTCTAGTGCTTGTTCACAGGTT GATGAATGAAGGACCGGTTCTGTTTCAGGAGGAGATTTTGTATGCTACTAGAAGAGGAACAAGGCTTTTGAATATGTCTGATTTTAGAGACGAGGCTCAT TCGAGTTCATGGGATCATTCTGCTTTTGTTAGAACTTATGCTATGTATCTGGATCAACGACTTGAGTTGATGTTGTTTGATAGGAAAGGTGGCAGTGTCG GTGGTGGTTCGGGTTCGGATTCTGCCGCTGATGATAGGTTTGCGGGGAGAGACAATTTTAGATCTCCGCCGCCACGGGCGACTGAGTATGAGTATAGAGG TGAATTCAGAGAAGAGAGTGGTGGGTATGGGAATGGGATGAGGAGAACGAGGTCGTTTGGTGATACGAGTGAGACTGTTGGAAATGAAGATAAGAGGATT GTGAGTGTAACTCCTTTGAGGGATATGAAACCGGAGAGGATTTTCGGGAAGATGGGTCATTTGCAGAGGCTTTTGGATAGGTTCTTGGCTTGTAGGCCTA CTGGGTTGGCGAAGAATAGCAGGATGATTTTGATTGCTCTGTATCCTGTAGTGAAGGAGAGCTTTCAGTTATATGGTGATATATGTGAGGCACTTGCTGT GTTGCTTGACAAATTCTTTGATATGGAGTACCCTGATTGTGTTAAGGCATTTGATGCTTATGCCAGTTCGGCTAAGCAGATTGATGAGCTCGTTATGTTC TTCAATTGGTGTAAGGAAACCGGTGTAGCAAGGTCTTCGGAGTACCCAGAAGTTCAGAGGATTACTAGTAAGTTGCTGGAGACGCTGGAGGAGTTTGTGA GGGATAGGGCCAAGAAGCCAAAAAGTCCAGAAAGGAAACAGCTGGAAGCACCGCCGGTGGTAAAAGACGAGGAGGAACCCGTCCCAGATATGAATGAAAT CAAGGCACTGCCTCCACCCGAGAATTACACCCAACCCCCTCCATCTGAACCGGAGCCCAAGCCTGAGCCCAAGCCACAATTTACCGAGGACTTGGTGAAT ATAAGAGATGATGCAGACACTGCAGATGATCAGGGCAATAAATTCGCTTTGGCGCTCTTTGCTGGTGGAGCAGCCAACAATGGAAATGGATCATGGGAAG CTTTCCCGTCAGATGGACAGCCGGAAGTGACTTCAGCATGGCAAACACCGGCCGCAGAATCTGGGAAGGCTGATTGGGAATTGGCATTGGTAGAAACTGC TAGCAATTTATCAAAGCAGAAGGCAACTCTAGGTGGTGGATTTGATCCCTTATTGCTGACTGGAATGTATGATCAAGGAATGGTGAGGCAGCATGCGAGC TCTGCTCAACTGAGTGGAGGGAGTGCTAGCAGTGTCGCATTGCCCGGACCTGGAAAGCCCACAACGCCTGTTTTAGCTCTCCCAGCCCCAGATGGAAGTG TGCAACCTGTGAATCAGGATCCATTCGCAGCATCATTAAGCATTCCACCACCCTCATATGTGCAAATGTCTGATATGGAAAAGAAACAGCAGTTACTAGT GCAGGAGCAGCAGCTATGGCAACATTATGCAAGGGAGGGGATGCAAGGACAATCTAGCTTGGCCAAACTCGGGGGCCCTGGATACTATGCCGGAGGTCCC ATGCCAGCGATGCCTTATGGAATGCCCCCAGTCAATGGAATGGGACCACCCGCCGGGTACTACTATTCTCCATCATGATGATTCTCTGTAGATTACTTTG TTCATTTCATTTTTTGTTTACTATGACAGTGTTTTCCTTTGTTTTTAATGATGGTATATTATTCTTGAGATCTGCACGTTAGTACAATGGGGGTGCTAAG GAGACTGACTGAGTTGAAGAGACCAAATTCTTGTTGGTTTTTTATGTTGGGAAGAGGAGGGTGTGACTCAATTGTGATGTTTCTGTGTCTTGTAATTCTA GCATTTTGTTCTTGATTTTTGTACTTAAGTGATTCTTGCTCCTCAAAAAACAACCGCATAACTAATGTAAATTTTATTAAATCTTGCTGCTGAATCTTGA TTGGATTATGCCAAATGATATTTCCATATTGTCTTGTGGGAACAAATGTGGCTGCTTGTTAAACTCTAGCACAATAATCAGGGAGTGAGTGGTTCAACAT GGGTTGGAGTTAGATATGTTAGTCCCATGATGGGTTTGACTTGTAAGTAACCGATTTGGTAATTTTTAAGTTTTCTATTACCATTGTTAACTTTACCGGA TCATTAACCTTTTCCTCAGTCCTTTATTAGATGTGAAGTAATGAACATGGATCCTCTGTCCCAAGAGGACTCTGTCTCCCTGTCCCTTGTTGAATGAAAT AGCAGGGAATAATATTAAAATATTACCTTACATTTTTTATAATTTTTTCTTTTAATAATATGATGCGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_150457; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309180
| Blastp | Putative clathrin assembly protein At2g25430 from Arabidopsis with 74.21% of identity |
|---|---|
| Blastx | Putative clathrin assembly protein At2g25430 from Arabidopsis with 72.2% of identity |
| Eggnog | Clathrin assembly protein(ENOG410XQ90) |
| Kegg | Link to kegg annotations (AT2G25430) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437751.1) |
| Pfam | ANTH domain (PF07651.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |