| Id Trinity | TRINITY_DN47177_c4_g11_i1 |
|---|---|
| Name Transcript | Ll_transcript_309646 |
| Sequence | CTTGTCTTTGCCACCACTTTCCGGCATTGTAACTCGCTTCTTTCTGAAAGCCTTCCCCTTTTTGTAATGTTCTCATCTGGGGCTTAAGAAACACTAACGG CCACAGTTTGAGAAAGGTTCCTTGACTTATGGCATTTGAGCACTACCTTCCCTGGGAATGTAAAAGCAAAAGCGTTCCGAATGCTGTGACGGAAACAGAA AATTACAACGGTTGTTTCGATTGCAACATTTGCTTAGACTTTGCATATGAACCAGTAGTCACTTTTTGTGGCCACCTTTACTGCTGGCCTTGCATCTACA AGTGGCTTCATGTCCAAAGTGATTCTCTTGCATCTGATGAGCACCCACAATGCCCTGTTTGCAAGGCTGATATATCTCACACCACAATGGTCCCACTCTA TGGCCGCGGCCAGGCCTCGACTCAAAGTCACCGTGATGGAAAAGCATCCACTTGTTTCGATATTTTTGTACCACATAGGCCTTCTGCTTCTAGTGCTCAA GCTCTTTTGACAACATCATCTCAAAGTGGTCAACAGTATCCACACCATAATCCTTATCAGGGTCACCATGAAGAGAATGCCACCCCTGAAATGCTCAATC CAGGATACGAAAACCCTGCGGTTGGCATGTTTGGAGAGATGATTTATGCTAGAGTGTTTGGCAACTCCGAGAATTCGAATGCCCACCCGAATTCTTATCA GCTCATGGGAAGTGATAGCACTAGATTGGGAAGGCAAGAGATGCTGGTAGACAAATCACTGAACAGAATTTCGATTTTTCTTTTTTGCTGCTTTCTTCTG TGTCTTATTGTCTTCTAAGTAAGTAGTTGAGATTATTTGTATTCTCTCCTTTCTGTTGTATACTTTTAAAGAAGCATGATATATTGGAGTTGGATTTTGC AGAAGCTCAGAGTTGTTATATACCTTACTTTATGGAATGCAGTGGTTTTGTAGTTTAAAGATGTAATACCTTATGCAGCTTTTAAAGTAAAGAACTTTAT TAGTTAAAGATGGAC BLAST |
| Tissue | pods |
| Gene name | LI_gene_150473; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309646
| Blastp | E3 ubiquitin-protein ligase RMA1H1 from Capsicum with 44.87% of identity |
|---|---|
| Blastx | E3 ubiquitin-protein ligase RMA3 from Arabidopsis with 38.99% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107855034) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019418143.1) |
| Pfam | Ring finger domain (PF13639.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |