Id Trinity | TRINITY_DN47179_c3_g1_i1 |
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Name Transcript | Ll_transcript_308965 |
Sequence | ATCAATTTATATGAGAGAGATCCCATCTTGCATATATCAGTTCATGTTGTTTAGGGCTGAAGCCATACAATTAACAAAGCTAGCTAACTTGCATTCTCTC GGGTTTTATCTTAATCATCAAGATACCAACACTGCAGCTTATTTCTCATCACTGAAGTACTGTTTCTGAGTACTTTCTTATTATAAACTGAGTTAAACTA AGAGTTGCAGAAACAGATTATGATGATGCTGGAAAAGATAGATGATGGAGAAGCTTCAAATAGTTTCCCTCTTAACCCGACAACTGGTTCATCTAATAAT TCTGATCCTGTTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGATCCTGAAGCTGAAGTCATAGCCTTATCACCAAAGACACTAATGGCAACGAACA GATTCTTATGTGAAACATGTGGGAAGGGTTTCCAAAGGGATCAAAATCTTCAACTACATAGACGTGGACACAACCTACCTTGGAAGCTTAAGCAGAGAAC AAGCAAAGAAGTGAGGAAGCGAGTTTATGTGTGCCCAGAGAAAACTTGTGTCCACCATAACCCTGCAAGGGCTTTGGGAGACTTAACTGGGATAAAAAAA CACTTTTGCAGAAAGCATGGGGAGAAGAAATGGAAGTGTGAAAAATGCTCCAAGAAATATGCAGTTCAATCAGATTGGAAGGCCCATAGCAAGATTTGTG GGACTAGAGAGTATAAATGTGACTGTGGCACCCTTTTCTCCAGGAAGGACAGCTTTGTAACACATAGAGCCTTTTGTGACGCATTATCTCAAGATTGTAT GAAAGTTCCATCAGCTTTAAGTAACTTGACAAGTATTCATTTGACCAATAATAATACTCAAGTGCCTAGAATCCCTCAGATTTTTCCAGAATTTCGTTCA GAATATGGTAGTAATTCAGTTTCAGAACCATTGGAGATTAATTATGCCAACAATTCTCATCAGCTTCATTGCTTCCCAGGCAAATTGAGTGCTTTTTCAT CAAATGCAAACTCTGTTGTCTGCACCCATATGCCTGATTTAGTAGAAACAATGAACATGTTTGGGTCAACACCTCAACAAACACAGTGGCTGAATTACCA AGCATCATTCACAAGTGGCAATAACAACAACTTATCTATGCCATTGTCTGCACTACTGCCACATGGACTGAAGCAAGAACAAGAAGAAAACAAACAAGAC TTGTCTCATACTGCTGCAAACTCTGTGTACTTCATGTCAGCCACATCACTGTTGCACACAGATAACTCATCATCCACCTTCAACAACAATAACAGCAACA ATCATAATGTTTTTGGCTTGATGGGCTCAAATATTCTCTCAAATACATCAAGGATCAATAATAACAATATTGTAGGTGTTCAAAGGTTTTTCAAGGAAGG GAACGTGAATCATGAGCCGATGAACTTTGAAGGCGGCAACACCAACCTTGGAGGTGGTTTTTCAATGGATGATTCAAGGTCAAATAATAATAAGGACCAG CTTGGTTTAACAAGAGATTTTTTGGGTGTTGGAGATGAGTCAATAACAATAAGCAGACCCTTCGATCTGGCTGAGTTTAATGCAATGGAATCAACCATGG AGGTGCATAATAGCCATTATGGTGGACATTACTGCTAGTGCTAGCTCTAGTTGAAATTTCATGAAATTAAGTTGCTTAGAGCTAAAGAAAATAGCCAAGC TCGTGTAATTTTCATGACAATTTTGTCCCAAAATAAAAAAGGTAAAGAATATCATGGTAATTTCGGTTGTTTTATAAAATCAAATAATATTTATACTTAT ATATGGAT BLAST |
Tissue | pods |
Gene name | LI_gene_150493; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_308965
Blastp | Zinc finger protein MAGPIE from Arabidopsis with 83.89% of identity |
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Blastx | Zinc finger protein MAGPIE from Arabidopsis with 83.89% of identity |
Eggnog | Zinc finger protein(COG5048) |
Kegg | Link to kegg annotations (AT1G03840) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464898.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |