Ll_transcript_308974

• Id Trinity: TRINITY_DN47179_c3_g1_i4
• Name Transcript: Ll_transcript_308974
• Sequence: GTTGAAGACAATATATATAATTAACAAAGCTAGCTAGCTCCCATTCTCTCATGTTTTCTGTTAATCATTCCAAACACTAATACTACTCCTTTCTCACTCA ACTTAGTTTCTTTTTACAAAAACTGAGTCGTACAAATAGTTGAAGAAACATATTAATATGCTGGAAAAGATGGATGATGGACAAGTTTCAAATGGTTTCC CTCAGAAATTAACAACTGTTTCATCAAATAACCCTAATCTTGTTTTGAAGAGAAAGAGAAACCTCCCAGGAAACCCAGATCCTGAAGCTGAAGTCATAGC CTTATCACCAAAGACACTAATGGCAACAAACAGGTTCTTGTGTGAAACATGTGGGAAGGGTTTCCAAAGGGATCAAAATCTTCAACTTCATCGACGTGGA CACAACCTACCTTGGAAGCTGAAACAAAGAACAAGCACAGAAATAAGGAAACGAGTTTATGTGTGTCCAGAGAAAACTTGTGTCCATCATAACCCTTCAA GGGCTCTCGGAGACTTAACTGGGATAAAAAAGCACTTTTGCAGAAAGCATGGAGAGAAGAAATGGAAGTGTGATAAGTGTTCAAAGCGTTATGCAGTGCA ATCAGATTGGAAAGCACACTCAAAGACGTGTGGTACCAGAGAATACAAATGTGATTGTGGAACTATCTTTTCTAGGAGGGATAGCTTCATCACTCATAGG GCCTTCTGTGATGCCTTGGCAGAAGAAACAGCTAGGGTAAATGCAACATCAAACATAAGCAACTCTCTAGGCCCTAACTTTAGTTACAACATCATGGGAA CTCCCCAAGTCCCTAACATGGCAACCCATTTTTCTTCAATATTTGTGCCAATTTCAAGTACTGGTCACGAAACTAGTACTCACACCACAAGAGGGCTATC CCTTTGGATGGACGAACTATCTCATCAGGCTCATGAAACAATGGTCAATGGAAATTTTCACCAACTTGGGTCAGCCACAAGCTCAGGGTCAGCAATATAT GATGTTAATAATAACCCGCTTGTTCAATACTCAAATAATCCTCCACCCTCTAATAATTATCGGCCAAACTGGATTTTGGGAACTAAGCCTTCTTCCAATA GTAGCCAGGAGCTTATAACTAGCACTACTAGTTCACTTCCACTAGTCAATATTATTAAGGATGCTACATGTACAAACCAGCTTATAAGTGTTCCTTCCTT GTATAGCTCCCAACACCAATCCCACCAAACATCCTCAGCAACAAATATGTCAGCCACAGCTTTGTTGCAAAAAGCTGCTCAGATTGCTGCAACCTCAACT ACTG
• Tissue: pods
• Gene name: LI_gene_150493;
• Additional information: details;

Expression of Ll_transcript_308974

FPKM

• PAB: 0.1
• PNAB: 0
• PS1: 0.1
• PS2: 0.1
• PS3: 0.1
• PW1: 0.1
• PW2: 0.3
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_308974

• Blastp: Zinc finger protein MAGPIE from Arabidopsis with 56.77% of identity
• Blastx: Zinc finger protein MAGPIE from Arabidopsis with 85.13% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT1G03840)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464968.1)
• Pfam: Zinc finger, C2H2 type (PF00096.25)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;