| Id Trinity | TRINITY_DN47179_c3_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_308976 |
| Sequence | ATCAATTTATATGAGAGAGATCCCATCTTGCATATATCAGTTCATGTTGTTTAGGGCTGAAGCCATACAATTAACAAAGCTAGCTAACTTGCATTCTCTC GGGTTTTATCTTAATCATCAAGATACCAACACTGCAGCTTATTTCTCATCACTGAAGTACTGTTTCTGAGTACTTTCTTATTATAAACTGAGTTAAACTA AGAGTTGCAGAAACAGATTATGATGATGCTGGAAAAGATAGATGATGGAGAAGCTTCAAATAGTTTCCCTCTTAACCCGACAACTGGTTCATCTAATAAT TCTGATCCTGTTTTGAAGAGGAAGAGAAACCTCCCAGGAAACCCAGATCCTGAAGCTGAAGTCATAGCCTTATCACCAAAGACACTAATGGCAACGAACA GATTCTTATGTGAAACATGTGGGAAGGGTTTCCAAAGGGATCAAAATCTTCAACTACATAGACGTGGACACAACCTACCTTGGAAGCTTAAGCAGAGAAC AAGCAAAGAAGTGAGGAAGCGAGTTTATGTGTGCCCAGAGAAAACTTGTGTCCACCATAACCCTGCAAGGGCTTTGGGAGACTTAACTGGGATAAAAAAA CACTTTTGCAGAAAGCATGGGGAGAAGAAATGGAAGTGTGAAAAATGCTCCAAGAAATATGCAGTTCAATCAGATTGGAAGGCCCATAGCAAGATTTGTG GGACTAGAGAGTATAAATGTGACTGTGGCACCCTTTTCTCCAGGTACACCTATATGGAGTTGGAGTCCCATTATTTAATGTCTCATCTTATATACCCTTT GTTTCTTTAATTCATGCATTGCATTCAATTAAATGAAAGAAACAGGATCCCCACAATTTAATGTGAAATTTAATATCAAATGTTCTTTTTTTCAATGACT AAAGTTTAATGTTTTGATAGATATTAATGATGCCAATATCATGCATGCAATGAGTGATTGAAGAATATTTGATTGGACTATTGGAGTAATAAATGATGGT AGTTATATTGATGTTCATTTATTTATTTATATATGTGCTACAAATCAGGAAGGACAGCTTTGTAACACATAGAGCCTTTTGTGACGCATTATCTCAAGAT TGTATGAAAGTTCCATCAGCTTTAAGTAACTTGACAAGTATTCATTTGACCAATAATAATACTCAAGTGCCTAGAATCCCTCAGATTTTTCCAGAATTTC GTTCAGAATATGGTAGTAATTCAGTTTCAGAACCATTGGAGATTAATTATGCCAACAATTCTCATCAGCTTCATTGCTTCCCAGGCAAATTGAGTGCTTT TTCATCAAATGCAAACTCTGTTGTCTGCACCCATATGCCTGATTTAGTAGAAACAATGAACATGTTTGGGTCAACACCTCAACAAACACAGTGGCTGAAT TACCAAGCATCATTCACAAGTGGCAATAACAACAACTTATCTATGCCATTGTCTGCACTACTGCCACATGGACTGAAGCAAGAACAAGAAGAAAACAAAC AAGACTTGTCTCATACTGCTGCAAACTCTGTGTACTTCATGTCAGCCACATCACTGTTGCACACAGATAACTCATCATCCACCTTCAACAACAATAACAG CAACAATCATAATGTTTTTGGCTTGATGGGCTCAAATATTCTCTCAAATACATCAAGGATCAATAATAACAATATTGTAGGTGTTCAAAGGTTTTTCAAG GAAGGGAACGTGAATCATGAGCCGATGAACTTTGAAGGCGGCAACACCAACCTTGGAGGTGGTTTTTCAATGGATGATTCAAGGTCAAATAATAATAAGG ACCAGCTTGGTTTAACAAGAGATTTTTTGGGTGTTGGAGATGAGTCAATAACAATAAGCAGACCCTTCGATCTGGCTGAGTTTAATGCAATGGAATCAAC CATGGAGGTGCATAATAGCCATTATGGTGGACATTACTGCTAGTGCTAGCTCTAGTTGAAATTTCATGAAATTAAGTTGCTTAGAGCTAAAGAAAATAGC CAAGCTCGTGTAATTTTCATGACAATTTTGTCCCAAAATAAAAAAGGTAAAGAATATCATGGTAATTTCGGTTGTTTTATAAAATCAAATAATATTTATA CTTATATATGGAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_150493; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_308976
| Blastp | - |
|---|---|
| Blastx | Zinc finger protein MAGPIE from Arabidopsis with 91.78% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464898.1) |
| Pfam | - |
| Rfam | - |
| GO | - |