Ll_transcript_308981

• Id Trinity: TRINITY_DN47179_c3_g1_i8
• Name Transcript: Ll_transcript_308981
• Sequence: GGAAACCCAGATCCTGAAGCTGATATCATAGCCTTATCACCAAAGACTCTAATGGCAACAAACAGGTTCTTATGTGAAACATGTGGGAAGGGTTTCCAAA GGGATCAAAATCTTCAACTGCATAGACGTGGACACAACCTACCTTGGAAGCTGAAACAAAGAACAAGCACAGAAATAAGGAAACGAGTTTATGTGTGTCC AGAGAAAACTTGTGTCCATCATAACCCTGCAAGGGCTTTGGGAGACTTAACTGGGATAAAAAAACACTTTTGCAGAAAGCATGGGGAGAAGAAATGGAAG TGTGAAAAATGCTCCAAGAAATATGCAGTTCAATCAGATTGGAAGGCCCATAGCAAGATTTGTGGGACTAGAGAGTATAAATGTGACTGTGGCACTTTCT TCTCTAGG
• Tissue: pods
• Gene name: LI_gene_150493;
• Additional information: details;

Expression of Ll_transcript_308981

FPKM

• PAB: 0.2
• PNAB: 0
• PS1: 0
• PS2: 0
• PS3: 0
• PW1: 0
• PW2: 0
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_308981

• Blastp: Protein indeterminate-domain 1 from Arabidopsis with 86.55% of identity
• Blastx: Zinc finger protein MAGPIE from Arabidopsis with 90.44% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT5G66730)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464968.1)
• Pfam: C2H2-type zinc finger (PF13912.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;