Ll_transcript_308968

• Id Trinity: TRINITY_DN47179_c3_g3_i1
• Name Transcript: Ll_transcript_308968
• Sequence: TTGGTCTCTCTTCTCCTCAATTCCCCTCTCTCACTCCTTCTCTCACCGCCTTCTACCACCGCCGTACACTTTCACCGCCCACGCCGTTCACCAGCGACTC TAACATAATCCATCCTTATTTTTCGAAGAGAGTATATAACAATATGACAGAAACCGATAACCCTTCACCTTCATCAATGGCAGCTTCAGGAGAAGCTACT TTCTCTTCATCTTCCTTAGAAAACGCGTCTCAACCACCGCCTAAAAAGAAGCGTAGCCTTCCCGGAATGCCTGATCCAGATGCTGAGGTAATTGCTTTGT CGCCGACGACGCTAATGGCGACGAACCGTTTTGTGTGCGAGATCTGCAACAAGGGATTCCAACGGGAACAGAACTTGCAGCTTCATCGGAGAGGACATAA CTTACCGTGGAAGCTGCGGCAGCGATCAGGAAATGAAGTTCGGAAGAAAGTATACGTGTGTCCAGAACCGTCGTGCGTGCACCACCACGCGTCTAGGGCG CTTGGTGACCTCACCGGAATAAAGAAGCACTTTAGCAGAAAACACGGAGAGAAGAAGTGGAAATGCGACCGTTGCTCCAAGAAATATGCCGTACAATCTG ATTGGAAAGCTCATATCAAGACTTGTGGAACTAAAGAGTATAAATGTGACTGTGGCACTTTCTTCTCTAGGAGGGATAGCTTCGTAACGCACAGAGCTTT TTGTGATGCATTAGCGGAAGAGGCTAGATCACAAACCCTAACCGCCGTTAGCAAGGATGGTGTTGTGGCTTCTTCTTCGCCGCCGCCGCCGCCGCTTACT CCGTCGACCTCTGTGCTCTCTCCAACTTTGTCCATTCAAAGCTCAGAAATTCCAGAAAACTCAAAGAGGATGTCACCGCCGCCGTCGGATGCCATGGACA CCGGCAACACTTCCATCGTGATGGCATCCTCAACCACATCAGTTCCATCATCATTTTCCAAATTCTTCTCAAGCATTTCAGCACAAGAACGCACATCCCT CTCCCTCTCCACATCACCACTCTTTGACTCCACATCCCTATTCCATGATCCACATTACACTACTCCAACAGTTGCATCTCCACAACCTGCATTGTCTGCA ACTGCATTACTCCAAAAGGCAGCTCAAATGGGTGCAACTTCATCCAATGCATCATTGTTTCACGCTTTAGGCCTAGAAACAACATCATCTAACTCTGGCC AAGATCATATCACAACACTGCCATGGAATACCCTAATCCATATAAAGCAAGAGGAGATCAATCAGACTCTGCCACATAACTTGGGACTAGGTCTTGCCTC TGGGAATAGTAATGCAGGTTTTGCAAATGCAATGATGCAGTCTTCATCTGACTTATTTGGTGGTCCCGGTCAACCCACCATGACCCGAGATCTTCTTGGT CTAAGCATTGGTAACAATGGGGCTAGTTTAACTTCTTTTTTCACCTCTTTTGGAGGGAACTTCCAAACATCAGGTGGTGAAGGAGGAGGAGTTGGCCAAT AAATAAATAGCAATTAAGTTAATATCATATATTTATATTTTATAGCCATAAGCCAACTTTGGTGTAGTGTGGTTCATTAATGGAGTTAACTCTCTTGTCT TGTATCTATGTTCTTGGCATCACTTGAGTTGTTTACTAGTTAGAAAATGAATGAATAGGATAAAGTCATAGCTAGTATATTAATTACTTGCTGAATAATT TACAAGCCTATTGTTGCATGAAAAATCAAACAACAGTTAAATGGCAGAAAAGTGAAAATGTGACCAAAGGTATGCAGGGTCATTCTAGTTCTATTTGTAA TAACATCGTTATGTATTATTTATAAAGCAAATTTAGATTGGTGGTAACATGATAGAGGAGAGATATAGATTATAGACTATGATACTTCAGTGTTCTACGT TTTTTTAATTATGGGAGTTCAATGGCCTTTTTAACCTTGTAATTGGAATGTTAGAATGAAAGAGATAATGTATTATAAGATTGAC
• Tissue: pods
• Gene name: LI_gene_150495;
• Additional information: details;

Expression of Ll_transcript_308968

FPKM

• PAB: 3.5
• PNAB: 6
• PS1: 5.7
• PS2: 9.7
• PS3: 6.1
• PW1: 20.4
• PW2: 10.6
• PW3: 4.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_308968

• Blastp: Protein indeterminate-domain 2 from Arabidopsis with 51.03% of identity
• Blastx: Protein indeterminate-domain 2 from Arabidopsis with 50.79% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT3G50700)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417281.1)
• Pfam: Zinc-finger double-stranded RNA-binding (PF12171.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;