Ll_transcript_310087

• Id Trinity: TRINITY_DN47181_c1_g1_i4
• Name Transcript: Ll_transcript_310087
• Sequence: TTTCATTTCGGCGCCTCCCTAAAATCAAAAAAATCACTTAACACATTCACTCACTCCATCCACTCACAACAACAACAGAAAGAGAAAGAAAAAAAAAGCA AAAGCTAATTTTCCCCTTCTTCAAAAGCCATTTTATTCTTTCCTCACTCAACAACAATGGATGATGAAGAAGACCATCAAAAGCTACCAGATCTAGTTAA AGAACTTATCCTCCGCTTAATTTCTCAAAACAATAACAACACAATCGATTCCCCAAACCCTAACTCCTCACACTTCCAATCTTCTCTCCGCTACGCTCAC CGCATCCTCTCCAGCCGCCTCAATCCCTCCGTCGCCCCCGACGCCGCCGCCATTGCTGACTCCGTCAAACGCCGCCTCGCCACTCAAGGCAGGTCATCAG ATGCTCTCTCTTTCGCCGATCTTTACACCAAATTCGCTTCGAAGACCGGCGTCGGAAGCGTTAATAATAAGTGGGCAGTCGTTTATTTACTTAAAATCAT ATCCGAAGATCGAAAAAACAGTAAGAATGTTGATACTTCGGTTCTGTTGCCCAATTTGAGTATTTCAGATGCTCAATTAGGTAAGGGTTCGAGTTCGGGT TCTAGGGTTTCGCGTGGCGCGGACAAGGGTTGGAGTAATGGGATTTTGTTGGTTGCAAAAGATTCTGAGAATAGACGCGAAATCGCGTTTAGGGAGTTTG TCAATTTAGTTAAGGAAGAGAATGAAGTGTCTGAAGAGGTTTTAGTTAGGGATGTGATTTATGCTTGTCAAGGTGTTGATGGGAGTTATGTGAAATTTGA GAATGATAATGTTGGTTATGTGTTATCGGAATTTGTTAAGGTACCTAGAGGAACTAGGACTATGGTTCAGAAGCTTTGTGAGTTGGGGTGGTTGTTTAAG AAAGTTACGGGGTTTATATCGCGGAGTATGGATAGGTTTGTGGCCGAAGATGTGGGAACTGTTGGGCAGGCGTTTTGTTCTGCATTGCAGGATGAGCTTA CTGAGTACTATAAGTTGCTGGCTGTGCTGGAGGCGCTTTCTTCGAATCCGATTCCGTTAGTGTCTGAATCAGCGAGTTCGGGGAATTACCTTTCGCTTAG GAGATTGGCTGTTTGGCTGGCGGAGCCTATGGTGAAGATGAGGTTGATGGCTGATTTGGTTGAGAAATGTAGGGTTTTGAGGGGCGGGGCGATGGCTGGT GCTATTCATTTGCATGCCCAGCATGGTGATCCGCTTGTTCACGAGTTCATGAGAAGATTGCTGCAGCGAGTGTGTTCTCCGCTGTTTGAAATGGTGAAGA GGTGGGTTTTGGAAGGGGAGTTGGAAGATATTTTTGCTGAGTTTTTCATTGTGGGTCAGCCGGTGAAAGTTGAATCCCTATGGAGAGAAGGTTACAGGCT CCATGATGCGATGCTTCCTTCGTTCATTTCGCCTTCGCTTGCTCAGCGGATTTTAAGGACTGGGAAGTCCATAAATTTCCTTCGTGTCTGTTGTGAGGAT CGTGGTTGGAGTGATGCCGCAGCAGAGATTGCCACGGATATAGGGGCCACAGCAAGAAGAGGTGGTTTCAGGTATGGTGAAACCGATACCCTTGAGTCAT TGGTTGATGAAGCTGCGAAAAGAATTGATAAGCATCTGTTGGATGTAATTTACAAGAGGTACAAATTCAAAGAACACTGTCTCGCAATTAAGCGGTATCT ATTGCTTGGGCAAGGTGATTTTGTGCAGTATCTAATGGATATTGTTGGGCCGGAGCTATCCGAGCCAGCTAACACTATAAGCTCTTTCAAACTTTCTGGG TTGCTTGAAACTGCAATTCGGGCATCTAATGCTCAGTATGACGATCATGACATTTTGGATAGGCTCCGGGTCAAAATGATGCCTCATGAAAGTGGGGATA GGGGCTGGGATGTATTTTCACTGGAATATGATGCAAGAGTTCCACTAGATACTGTGTTCACAGAGTCTGTGATGGCAAGGTATTTGAGAATTTTTAACTT TCTATGGAAGCTTAGAAGAGTTGAACATGCGCTTATTGGTGCCTGGAAGACCATGAAACCAAACTGTATTACTTCTAATTCCTTTACGAGATTGCAACAT GCGGTAAAGATGCAATTAGTTTCAACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTTATTTCAAACTTGCAATATTATATAATGTTTG AAGTCTTGGAGGTATCATGGTCAAACTTTTTAAGTGAGATAGACGTAGCAAAAGATCTTGATGACCTACTTGCAGCTCATGAAAAATATTTGCATTCCAT TGTAGAGAAATCTCTCCTTGGAGAGCTTTCCCAGTCCCTTTACAAGTCACTACTTGTAATATTTGATCTTATATTACGTTTTCGGAGCAATGCAGATCGG TTATATGAAGGTATTCACGAGTTGCAAACAAGAATCTCAGAATCTTCCGTATCCTCTCGAAATCAGAGTAAATCACGTAAGCAACTGGTTGATAAGTCTG TGGACCAAGGATCCTGGATTGCTGATGGGAGGAAAGCCCTTACACAACGAGCTGGTGAATTTCTTCGAAGTATGGGACAAGATCTGGATGCAATTGCTAA GGAGTATTCATCATTGGAAGATGAATTCATTTCACAGTTGCCTGTGCAGCAGCATGTTGATCTGAAGTTTCTCTTTTTCCGTCTCGACTTCAATGAATTT TATCGACGGGCGTCTCCTAACTAGCATAAAAGGAATCTGTGAACAAAGCTGAGGGTCAGGTTGAAGCATGATTTCTTCAAGAATATAAGGCATTAACAAA GCTTTGCGACTAGCTAACTGGTGTTGAGTGTTTCAGTAGAACAATTCTATTGGTGCCAACTTCTGTCCTGACCAACTTCCTTGGGTCATTAATTGACTAT AGGTACGACGGATATCTTTGCTTTCACACACACACACATGTTTTCTATGGAGAATCTGACCCTCCTTTTCTCTGTAGCAGATACTCATTTTTTGTTGTTT ACGAGTTAGTTTGTGGTGGATGTGAAGGTACTAATAGTCTGATTGGATGCATGATGTGATATACATGTAAGTATCCGAAGATCTGATGATTTAATTAGTG TTTTCAGCAACTTTTGCAATCTGTGCTGTTCAGAGATTGTCCATTTGTATTCTCGTATTTTCATTGGTTGAATGAAAATTGGTGTCTGAAAATATAGTTT CTGGTAGCTTGTTGCATTTATTCTGGTTTTACTATCTCTTCTCACTATGCAGAGTGCTTGAATATTTGCCTTGTGGCAGTAAAAAGTAAAACCACATGTG AATCAAGTATCAAGATGCTTGCTATACTTTATTCATGTGTAAGGCAATGAAGGAGCATCTTGATGATTCTTTTACAAACTCTATTCAGTGTGGAGCTTTA TGTTGTGCATTTTTTTCATGGTAGCTACACATGAATTGTAGAAGTTCATATGTGGATCTTGGAGTAATTACTATAACACATGCTTAGTTAACACAGTAAT GGTATTTTAGCTTGGAGAATTGCCTAGTATAAACTTGGTTGCTGTTGTGGCTTTAGAAAGAACTTTCCTCTTATTTTGATAAAAGAAGACTATACTGAGA GAGAGAGAGAGAAAAGAAAACAGAGAAGTACAAAGAATTGATAAGAGAAAAATTAAGCAGAAAAACAAAGAGATACCCAAAAAAAGAAATAATTTCCTTT ATTTTAGAGATGCATGTTTAAGGAAATAACTCAACTAAGTATCTGTTTTGCTGAAAATGTTGGATTTCCAAGTGGAGAGTACCCAAAAAATAAAGAATTT TCATTTATTTTAGAGATTTATGACAAATCCACGCTTACTATAAATGTTGAGTTAATATCATGAGAAGGGTACGAATAATTGAAGTTATTTTGTAGAATTT CTGAAAATCAGTAG
• Tissue: pods
• Gene name: LI_gene_150503;
• Additional information: details;

Expression of Ll_transcript_310087

FPKM

• PAB: 1.1
• PNAB: 7.8
• PS1: 5.9
• PS2: 3.5
• PS3: 3.7
• PW1: 2.9
• PW2: 2.4
• PW3: 2.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_310087

• Blastp: Gamma-tubulin complex component 3 from Arabidopsis with 74.59% of identity
• Blastx: Gamma-tubulin complex component 3 from Arabidopsis with 73.88% of identity
• Eggnog: Tubulin, gamma complex associated protein(ENOG410XQ5B)
• Kegg: Link to kegg annotations (AT5G06680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419482.1)
• Pfam: Spc97 / Spc98 family (PF04130.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;