Ll_transcript_310093

• Id Trinity: TRINITY_DN47181_c1_g1_i5
• Name Transcript: Ll_transcript_310093
• Sequence: TTTCATTTCGGCGCCTCCCTAAAATCAAAAAAATCACTTAACACATTCACTCACTCCATCCACTCACAACAACAACAGAAAGAGAAAGAAAAAAAAAGCA AAAGCTAATTTTCCCCTTCTTCAAAAGCCATTTTATTCTTTCCTCACTCAACAACAATGGATGATGAAGAAGACCATCAAAAGCTACCAGATCTAGTTAA AGAACTTATCCTCCGCTTAATTTCTCAAAACAATAACAACACAATCGATTCCCCAAACCCTAACTCCTCACACTTCCAATCTTCTCTCCGCTACGCTCAC CGCATCCTCTCCAGCCGCCTCAATCCCTCCGTCGCCCCCGACGCCGCCGCCATTGCTGACTCCGTCAAACGCCGCCTCGCCACTCAAGGCAGGTCATCAG ATGCTCTCTCTTTCGCCGATCTTTACACCAAATTCGCTTCGAAGACCGGCGTCGGAAGCGTTAATAATAAGTGGGCAGTCGTTTATTTACTTAAAATCAT ATCCGAAGATCGAAAAAACAGTAAGAATGTTGATACTTCGGTTCTGTTGCCCAATTTGAGTATTTCAGATGCTCAATTAGGTAAGGGTTCGAGTTCGGGT TCTAGGGTTTCGCGTGGCGCGGACAAGGGTTGGAGTAATGGGATTTTGTTGGTTGCAAAAGATTCTGAGAATAGACGCGAAATCGCGTTTAGGGAGTTTG TCAATTTAGTTAAGGAAGAGAATGAAGTGTCTGAAGAGGTTTTAGTTAGGGATGTGATTTATGCTTGTCAAGGTGTTGATGGGAGTTATGTGAAATTTGA GAATGATAATGTTGGTTATGTGTTATCGGAATTTGTTAAGGTACCTAGAGGAACTAGGACTATGGTTCAGAAGCTTTGTGAGTTGGGGTGGTTGTTTAAG AAAGTTACGGGGTTTATATCGCGGAGTATGGATAGGTTTGTGGCCGAAGATGTGGGAACTGTTGGGCAGGCGTTTTGTTCTGCATTGCAGGATGAGCTTA CTGAGTACTATAAGTTGCTGGCTGTGCTGGAGGCGCTTTCTTCGAATCCGATTCCGTTAGTGTCTGAATCAGCGAGTTCGGGGAATTACCTTTCGCTTAG GAGATTGGCTGTTTGGCTGGCGGAGCCTATGGTGAAGATGAGGTTGATGGCTGATTTGGTTGAGAAATGTAGGGTTTTGAGGGGCGGGGCGATGGCTGGT GCTATTCATTTGCATGCCCAGCATGGTGATCCGCTTGTTCACGAGTTCATGAGAAGATTGCTGCAGCGAGTGTGTTCTCCGCTGTTTGAAATGGTGAAGA GGTGGGTTTTGGAAGGGGAGTTGGAAGATATTTTTGCTGAGTTTTTCATTGTGGGTCAGCCGGTGAAAGTTGAATCCCTATGGAGAGAAGGTTACAGGCT CCATGATGCGATGCTTCCTTCGTTCATTTCGCCTTCGCTTGCTCAGCGGATTTTAAGGACTGGGAAGTCCATAAATTTCCTTCGTGTCTGTTGTGAGGAT CGTGGTTGGAGTGATGCCGCAGCAGAGATTGCCACGGATATAGGGGCCACAGCAAGAAGAGGTGGTTTCAGGTATGGTGAAACCGATACCCTTGAGTCAT TGGTTGATGAAGCTGCGAAAAGAATTGATAAGCATCTGTTGGATGTAATTTACAAGAGGTACAAATTCAAAGAACACTGTCTCGCAATTAAGCGGTATCT ATTGCTTGGGCAAGGTGATTTTGTGCAGTATCTAATGGATATTGTTGGGCCGGAGCTATCCGAGCCAGCTAACACTATAAGCTCTTTCAAACTTTCTGGG TTGCTTGAAACTGCAATTCGGGCATCTAATGCTCAGTATGACGATCATGACATTTTGGATAGGCTCCGGGTCAAAATGATGCCTCATGAAAGTGGGGATA GGGGCTGGGATGTATTTTCACTGGAATATGATGCAAGAGTTCCACTAGATACTGTGTTCACAGAGTCTGTGATGGCAAGGTATTTGAGAATTTTTAACTT TCTATGGAAGCTTAGAAGAGTTGAACATGCGCTTATTGGTGCCTGGAAGACCATGAAACCAAACTGTATTACTTCTAATTCCTTTACGAGATTGCAACAT GCGGTAAAGATGCAATTAGTTTCAACATTGAGGCGCTGTCAGGTTCTTTGGGTTGAAATTAATCACTTTATTTCAAACTTGCAATATTATATAATGTTTG AAGTCTTGGAGGTATCATGGTCAAACTTTTTAAGTGAGATAGACGTAGCAAAAGATCTTGATGACCTACTTGCAGCTCATGAAAAATATTTGCATTCCAT TGTAGAGAAATCTCTCCTTGGAGAGCTTTCCCAGTCCCTTTACAAGTCACTACTTGTAATATTTGATCTTATATTACGTTTTCGGAGCAATGCAGATCGG TTATATGAAGGTATTCACGAGTTGCAAACAAGAATCTCAGAATCTTCCGTATCCTCTCGAAATCAGAGTAAATCACGTAAGCAACTGGTTGATAAGTCTG TGGACCAAGGATCCTGGATTGCTGATGGGAGGAAAGCCCTTACACAACGAGCTGGTGAATTTCTTCGAAGTATGGGACAAGATCTGGATGCAATTGCTAA GGAGTATTCATCATTGGAAGATGAATTCATTTCACAGTTGCCTGTGCAGCAGCATGTTGATCTGAAGTTTCTCTTTTTCCGTCTCGACTTCAATGAATTT TATCGACGGGCGTCTCCTAACTAGCATAAAAGGAATCTGTGAACAAAGCTGAGGGTCAGGTTGAAGCATGATTTCTTCAAGAATATAAGGCATTAACAAA GCTTTGCGACTAGCTAACTGGTGTTGAGTGTTTCAGTAGAACAATTCTATTGGTGCCAACTTCTGTCCTGACCAACTTCCTTGGGTCATTAATTGACTAT AGATACTCATTTTTTGTTGTTTACGAGTTAGTTTGTGGTGGATGTGAAGGTACTAATAGTCTGATTGGATGCATGATGTGATATACATGTAAGTATCCGA AGATCTGATGATTTAATTAGTGTTTTCAGCAACTTTTGCAATCTGTGCTGTTCAGAGATTGTCCATTTGTATTCTCGTATTTTCATTGGTTGAATGAAAA TTGGTGTCTGAAAATATAGTTTCTGGTAGCTTGTTGCATTTATTCTGGTTTTACTATCTCTTCTCACTATGCAGAGTGCTTGAATATTTGCCTTGTGGCA GTAAAAAGTAAAACCACATGTGAATCAAGTATCAAGATGCTTGCTATACTTTATTCATGTGTAAGGCAATGAAGGAGCATCTTGATGATTCTTTTACAAA CTCTATTCAGTGTGGAGCTTTATGTTGTGCATTTTTTTCATGGTAGCTACACATGAATTGTAGAAGTTCATATGTGGATCTTGGAGTAATTACTATAACA CATGCTTAGTTAACACAGTAATGGTATTTTAGCTTGGAGAATTGCCTAGTATAAACTTGGTTGCTGTTGTGGCTTTAGAAAGAACTTTCCTCTTATTTTG ATAAAAGAAGACTATACTGAGAGAGAGAGAGAGAAAAGAAAACAGAGAAGTACAAAGAATTGATAAGAGAAAAATTAAGCAGAAAAACAAAGAGATACCC AAAAAAAGAAATAATTTCCTTTATTTTAGAGATGCATGTTTAAGGAAATAACTCAACTAAGTATCTGTTTTGCTGAAAATGTTGGATTTCCAAGTGGAGA GTACCCAAAAAATAAAGAATTTTCATTTATTTTAGAGATTTATGACAAATCCACGCTTACTATAAATGTTGAGTTAATATCATGAGAAGGGTACGAATAA TTGAAGTTATTTTGTAGAATTTCTGAAAATCAGTAG
• Tissue: pods
• Gene name: LI_gene_150503;
• Additional information: details;

Expression of Ll_transcript_310093

FPKM

• PAB: 1
• PNAB: 3.7
• PS1: 2.5
• PS2: 1.3
• PS3: 3.7
• PW1: 3.7
• PW2: 2.7
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_310093

• Blastp: Gamma-tubulin complex component 3 from Arabidopsis with 74.59% of identity
• Blastx: Gamma-tubulin complex component 3 from Arabidopsis with 73.88% of identity
• Eggnog: Tubulin, gamma complex associated protein(ENOG410XQ5B)
• Kegg: Link to kegg annotations (AT5G06680)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419482.1)
• Pfam: Spc97 / Spc98 family (PF04130.12)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;