| Id Trinity | TRINITY_DN47185_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_309419 |
| Sequence | AAACAACCCTCTTTCTCTCTTATAATCTCACACAAAAACAAAATGAGCAGTGTTAGTATGTGTGCTGAGCAACACAAGTTTCAATCCTCCCACCAACTTC TATCCCTTAAGAAATCACTTAGGGACATTGACATCCCACCAAGGAAGCGCCAAACTCGCCGTGCCACCATCACACATGACGGCGCTGCCGACATGTTTTC TGACGAGACCCTTTTCCAAAAGTACCTTCCTCACGACAACATGAACATGTTTGATGAATCTGGTGACGATTCTGACCCTTACTCGTCCGATCATTTCCGC ATGTACGAGTTCAAGGTGCGGAAGTGCAGTCGCAGCCGCAGTCATGACTGGACTGGCTGCCCTTTTGCTCATCCCGGCGAGAAGGCTCGCCGGCGGGACC CTAGACGGTACCACTATTCTAGTACCGTTTGTCCCGAGTATCGCCCCGGCTGCCGGTCGTGCAGCCGGGGTGATGCATGTGAGTTCTCTCATGGGGTTTT TGAGTGCTGGTTGCACCCTGCTAGGTATAGAACCGAAGCTTGCAAAGATGGCAAGAATTGCAAGCGAAAAGTGTGTTTCTTTGCGCACACACCTCGCCAA CTTAGGGTTCTACCTGTAAATTCACACCCTAGTTCAAATGAAATCATCAACTCATGCAACAATAATAACAAGGGCAAGTTCTTGAACCCTGCAGACATTA AGCACTCTTGTTTACTTTGTCATTGTAATTCTTGTGGTTCTACTTGTTCACCGACTTCTACTTTGTCTGGCATGTCTCTTTTTTCTTCTCCACCAATGTC ACCCTCTTCTTCTTCTGTAAATGGGGTCTCATCCATGTCTAGGTTTGTAGGATCTGAGAAAAACCATCACGATAGTGTTGGTGTGGTGAGTTATAAAGAC ATGTTCAATGAGCTTATGTGTTCATTGGAGGGTTTCAATGTTGCTGGTGAAAATTCTAGGTATAATTCTCCTCTTTCTTCTTCTTCCAAAGTACTGAAGA AGAATTTGAATTTGCTTGATGCTTCCTTCAACTGTGAGGATCAGCAGTATTTTGCTCTTTCTCCTTCTTCTAGAATTGAAAGATTCTCATCCAATGGTAG AAATTCAACCAACATGTTTTTTAAGAATGATGCAAAGTTTGTTAATGACCCAGATCTCGCGTGGGTGAATGAATTGCTCATGTAGATGATGACAACATAT TGAAGATAATGACGAAAATATGGTGATTATGATTGACTAGGTGTAAATACAGTGGGAATAAGGGAATAAGATAGTCTCTCTTGCTCCCTGTCTATAAACT CTGTCCCAGCCCAATTAACATCTGTAAACTCTGTCCCAGCCCAATTAACATCAAACAAGTAATATAAAAATATATTATTTTCTTTTTAAGAAACCTTATT TATTTATATGTCAATTTTTAATTGGTGGGGACATGAGATTGGCACATATTTTGGGATGGGTGACATGAGATTGGCACATATTTTGGGATGGGTGATCCTT GTTCATGAATAAGTAACATATCTTTTGAGGGA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150550; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_309419
| Blastp | Zinc finger CCCH domain-containing protein 2 from Arabidopsis with 45% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 20 from Arabidopsis with 66.88% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410XR0Z) |
| Kegg | Link to kegg annotations (AT1G03790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019465262.1) |
| Pfam | RNA-binding, Nab2-type zinc finger (PF14608.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |