| Id Trinity | TRINITY_DN47190_c0_g1_i13 |
|---|---|
| Name Transcript | Ll_transcript_310495 |
| Sequence | GTAGCACTTGCAGCTGGTTCAAACATTACGCTTCTTGCAGATCAGATAAAGAGATTTAAGCCTCAGCTTGTTTCTGTTAAAGATGAGTCTCTTATTGCGG AACTTGAAGAGGCTTTAAATGGTATTGAACATAAACCTGAGATCATCCCTGGAGAGCAGGGAATCATTGAGGTTGCTCGCCACCCAGATGCTGTCACCGT AGTCACAGGAATAGTGGGCTGTGCAGGACTCAAGCCTACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCTAACAAAGAGACGCTAATTGCT GGAGGTCCTTTTGTTCTTCCGCTTGCTAAGAAGCATAACATAAAAATACTTCCTGCTGATTCAGAGCATTCTGCCATTTTTCAGTGTATCCAGGGGCTGC CGGAGGGCGCACTTAGGAAAATTATTTTAACTGCATCTGGAGGTTCTTTCAGGGATTGGCCTGTAGAAAAACTAAAAGATGTTAAAGTTGCTGATGCATT AAAGCATCCCAACTGGAGCATGGGAAAAAAGATAACCGTGGACTCCGCTACCCTTTTCAACAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGA GCTGACTATGATGACATTGAGATTGTCATTCATGCTCAATCAATCATACATTCAATGATTGAAACACAGGACTCATCTGTGCTGGCACAGTTGGGGTGGC CTGATATGCGGTTGCCAATCCTCTATACATTATCATGGCCTGACAGAGTTCATTGTTCTGAAGTAACTTGGCCTCGCCTTGATCTTGCAAAGTAATATCA TTTTCCCCTGAAGCTTATACATCTCAACTCTATCAATTATCTCCAGTCGTTTTGATAAAACAGACAGATGCACTTATCATCAAGTTTTTAAATTTTATAG CCTTATGTTAAAATGAGTTTTTATAAAGTTTAAGATGAATAATCAAATGCATGAATGATCATAGTTTCATTTCTTCATTTTTGCTCCTTGCAAAGCTTTC CCCAGGGAGTATATTTCATTTTTCATGCCATGTAATGTAGATTGGATGAAATATGATAACTTTCTGCAAGTTTAGACATGTGAATATTGTGAAGAAATAA TAAATTGAGTGCATTATATCTTTCATGAGTTAAATTTTCCAGCAGCATCTTGAGGAAAGCATAAACTATGATCCTATAATTTTTGGTTTTCTGTGTTCTT TACAAGCACAAAATTTTATTATGTATGATGAATCATGTAATTAAATTTAACTTGGCATAGGACAAATTGTTGTTAATTTATTTAACAGAGACAAATTTCA AATGTGACTTTGCAGGCTTGGTTCACTAACATTTAAAGCTCCCGACAATGTTAAATACCCATCCATGAATCTTGCTTACGCTGCTGGCCGTGCTGGAGGC ACCATGACAGGGGTTCTTAGTGCAGCAAATGAGAAAGCTGTAGAATTGTTCATTGATGAAAAGATTAGCTATTTGGACATTTTCAAGGTTGTGGAACTAA CATGTGAGAAGCATCAAAATGAGTTGGTAACATCACCTTCCCTTGAGGAAATTGTTCACTATGACCAGTGGGCACGAAAATTTGCTGCTAGTCTACAGAG CTCGTCGGTTTTGACCCCTGTTCCAGCATGAGACTGATTTAAGAACAAAGGAATGTGTCTGATTTCTGCTAAATGCACCATAATTTAAGTGGGCATTTAA CTAAATTGTATATCAGTATACAATATAGCATGATGCATTCCCCATATATTGAATATAAGAGAAGTCTTTTGTTAATGGAATCTTTAGATTATATTTAATT GATCTTATATTTTTGTTGCAATTTCATTGAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150594; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310495
| Blastp | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Mentha with 90.53% of identity |
|---|---|
| Blastx | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Mentha with 90.53% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464149.1) |
| Pfam | 1-deoxy-D-xylulose 5-phosphate reductoisomerase (PF02670.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |