| Id Trinity | TRINITY_DN47190_c0_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_310496 |
| Sequence | GTAGCACTTGCAGCTGGTTCAAACATTACGCTTCTTGCAGATCAGATAAAGAGATTTAAGCCTCAGCTTGTTTCTGTTAAAGATGAGTCTCTTATTGCGG AACTTGAAGAGGCTTTAAATGGTATTGAACATAAACCTGAGATCATCCCTGGAGAGCAGGGAATCATTGAGGTTGCTCGCCACCCAGATGCTGTCACCGT AGTCACAGGAATAGTGGGCTGTGCAGGACTCAAGCCTACAGTTGCAGCGATAGAAGCAGGGAAAGACATAGCTTTGGCTAACAAAGAGACGCTAATTGCT GGAGGTCCTTTTGTTCTTCCGCTTGCTAAGAAGCATAACATAAAAATACTTCCTGCTGATTCAGAGCATTCTGCCATTTTTCAGTGTATCCAGGGGCTGC CGGAGGGCGCACTTAGGAAAATTATTTTAACTGCATCTGGAGGTTCTTTCAGGGATTGGCCTGTAGAAAAACTAAAAGATGTTAAAGTTGCTGATGCATT AAAGCATCCCAACTGGAGCATGGGAAAAAAGATAACCGTGGACTCCGCTACCCTTTTCAACAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGA GCTGACTATGATGACATTGAGATTGTCATTCATGCTCAATCAATCATACATTCAATGATTGAAACACAGGACTCATCTGTGCTGGCACAGTTGGGGTGGC CTGATATGCGGTTGCCAATCCTCTATACATTATCATGGCCTGACAGAGTTCATTGTTCTGAAGTAACTTGGCCTCGCCTTGATCTTGCAAAGCTTGGTTC ACTAACATTTAAAGCTCCCGACAATGTTAAATACCCATCCATGAATCTTGCTTACGCTGCTGGCCGTGCTGGAGGCACCATGACAGGGGTTCTTAGTGCA GCAAATGAGAAAGCTGTAGAATTGTTTATTGATGAAAAGATTAGCTATTTGGATATTTTCAAGGTTGTGGAGCTCACATGTGAGAAGCATCAAAGTGAGT TGGTAACATCGCCTTCCCTTGAGGAAATTGTTCACTATGACCAATGGGCTCGGAAATATGCTGCTAGTCTGCAAAGCTCGTCAAGCTCGACTCCTGTTCC TGCATGAGATTGTTTTAAGATGAAGGGCGTGCATGATTGATTCCTGTCAACTGCACCATAATTTCTGTGGGCATTGAACTGAATTGTATATTAGTATACA ATATAGTGTGATGCATTCCCCAGATATTGAAGAAAGAGAATGCTTTTATTAATGGAATCTTTAGATTCTATTTAATTGATCTTCTCATAGTTTTGTTGCA ATTTCATTGAAGATCACTTCCTGTATTTTCCCCCTTGAACGCCTTGATTTTATATCGAATAACTGCTTTCAATCTTCCTGAGTTCATCCATTTTTTATGG AGTTGCAATAGAAGAAAAGGTGTCACAGAAATTATTACCCCCTTCCTCTAATGTTTTGACTGAATTCATGTTTGGTATACTTTTCTTATGGAGCGTGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_150594; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_310496
| Blastp | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 88.59% of identity |
|---|---|
| Blastx | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 88.59% of identity |
| Eggnog | Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (By similarity)(COG0743) |
| Kegg | Link to kegg annotations (AT5G62790) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464149.1) |
| Pfam | 1-deoxy-D-xylulose 5-phosphate reductoisomerase (PF02670.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |