Ll_transcript_310490

• Id Trinity: TRINITY_DN47190_c0_g1_i8
• Name Transcript: Ll_transcript_310490
• Sequence: CATTGCCTACTGTGTGAACCCAGTAAAATTTTCAGTTGCAAGTTTGTCGATGTTTTGTTCCGATATCAGTGAATATGCATTTCAATTTTACAAATCTGTA ACAAGATTAACGAGAGAGAAAAGACACCAAGTTAACGATGGTATTTGTTATCATATATCGGACAACGGATATTACACAGCTGAAATACCTCTCATTGTTT TATTAGCCTACAGTTGCTGCAATAGAAGCTGGGAAAGACATAGCTTTGGCTAACAAAGAGACACTTATTGCTGGAGGTCCTTTTGTTCTTCCACTTGCGA AGAAGCATAACATAAAAATACTGCCTGCTGATTCAGAGCATTCTGCCATTTTTCAGTGTATCCAGGGGCTGCCGGAGGGCGCACTTAGGAAAATTATTTT AACTGCATCTGGAGGTTCTTTCAGGGATTGGCCTGTAGAAAAACTAAAAGATGTTAAAGTTGCTGATGCATTAAAGCATCCCAACTGGAGCATGGGAAAA AAGATAACCGTGGACTCCGCTACCCTTTTCAACAAGGGTCTAGAAGTAATTGAAGCACATTACTTGTTTGGAGCTGACTATGATGACATTGAGATTGTCA TTCATGCTCAATCAATCATACATTCAATGATTGAAACACAGGACTCATCTGTGCTGGCACAGTTGGGGTGGCCTGATATGCGGTTGCCAATCCTCTATAC ATTATCATGGCCTGACAGAGTTCATTGTTCTGAAGTAACTTGGCCTCGCCTTGATCTTGCAAAGTAATATCATTTTCCCCTGAAGCTTATACATCTCAAC TCTATCAATTATCTCCAGTCGTTTTGATAAAACAGACAGATGCACTTATCATCAAGTTTTTAAATTTTATAGCCTTATGTTAAAATGAGTTTTTATAAAG TTTAAGATGAATAATCAAATGCATGAATGATCATAGTTTCATTTCTTCATTTTTGCTCCTTGCAAAGCTTTCCCCAGGGAGTATATTTCATTTTTCATGC CATGTAATGTAGATTGGATGAAATATGATAACTTTCTGCAAGTTTAGACATGTGAATATTGTGAAGAAATAATAAATTGAGTGCATTATATCTTTCATGA GTTAAATTTTCCAGCAGCATCTTGAGGAAAGCATAAACTATGATCCTATAATTTTTGGTTTTCTGTGTTCTTTACAAGCACAAAATTTTATTATGTATGA TGAATCATGTAATTAAATTTAACTTGGCATAGGACAAATTGTTGTTAATTTATTTAACAGAGACAAATTTCAAATGTGACTTTGCAGGCTTGGTTCACTA ACATTTAAAGCTCCCGACAATGTTAAATACCCATCCATGAATCTTGCTTACGCTGCTGGCCGTGCTGGAGGCACCATGACAGGGGTTCTTAGTGCAGCAA ATGAGAAAGCTGTAGAATTGTTTATTGATGAAAAGATTAGCTATTTGGATATTTTCAAGGTTGTGGAGCTCACATGTGAGAAGCATCAAAGTGAGTTGGT AACATCGCCTTCCCTTGAGGAAATTGTTCACTATGACCAATGGGCTCGGAAATATGCTGCTAGTCTGCAAAGCTCGTCAAGCTCGACTCCTGTTCCTGCA TGAGATTGTTTTAAGATGAAGGGCGTGCATGATTGATTCCTGTCAACTGCACCATAATTTCTGTGGGCATTGAACTGAATTGTATATTAGTATACAATAT AGTGTGATGCATTCCCCAGATATTGAAGAAAGAGAATGCTTTTATTAATGGAATCTTTAGATTCTATTTAATTGATCTTCTCATAGTTTTGTTGCAATTT CATTGAAGATCACTTCCTGTATTTTCCCCCTTGAACGCCTTGATTTTATATCGAATAACTGCTTTCAATCTTCCTGAGTTCATCCATTTTTTATGGAGTT GCAATAGAAGAAAAGGTGTCACAGAAATTATTACCCCCTTCCTCTAATGTTTTGACTGAATTCATGTTTGGTATACTTTTCTTATGGAGCGTGC
• Tissue: pods
• Gene name: LI_gene_150594;
• Additional information: -

Expression of Ll_transcript_310490

FPKM

• PAB: 0
• PNAB: 0.6
• PS1: 0.8
• PS2: 0
• PS3: 0.4
• PW1: 0.4
• PW2: 0
• PW3: 0.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_310490

• Blastp: -
• Blastx: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic from Arabidopsis with 94.62% of identity
• Eggnog: Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) (By similarity)(COG0743)
• Kegg: Link to kegg annotations (AT5G62790)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463865.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;