Ll_transcript_309088

• Id Trinity: TRINITY_DN47191_c1_g1_i1
• Name Transcript: Ll_transcript_309088
• Sequence: GCACTGCATTTTTTCTGTCTTTGAAGCCAAAACATGTCTCTCTCACACTTCACTCCTATATGTTGCATCTCTTCTTCAACTTCAGATTCTTTGATGATTC CACCAGATGTAAAGAAGAAAAAGAACAGTACAGTTCTGTGCCGTGATGAATCTAAAGAAAGAATCAAGAACATGTTCAACAAGGTTGAACTATCAGCTTC TTCATATGATACTGCTTGGGTGGCAATGGTTCCATCTCCAAATTCTTCCGAAGCCCCATTTTTCCCTCAATGCATAAATTGGTTGTTGGATAACCAACTC TTTGATGGCTCCTGGGGTTTTGCCGATCGTGATCCATTACTTATGAATGATGCTCTCTTATCTACCTTGGCAAGTATCCTTGCATTAAAGCGATGGGGCA TTGGCGACGACCAAATTGATAAGGGTCTTCTATTTCTAAAGTCAAACATTACTTCAATCAATGACGAGAAGCAACATCTTCCCATCGGATTTGATATACT TTTTCCTTCTTTGATTGAATATGCACAAATTTTGGGCATTAATCTTCCTCTTGGAGCAACAAGCTTGGAAGCAATTACTCGAAAAAAAGAGACAGAGCTC CAAAGAGGCTTTCAAAGCAATTCTGAAGGGTGGAACGCATATCTAGCATATTGTTCCGAAGGAATGCAGAAGTCGAGGAATTGGGAAACAGTCATGAAGT ATCAAAGAAAAAATGGATCTTTGTTTAACTCGCCTGCTACAACAGCAGCCATTTATAATCAACTTAAGAATACTGACTGTCTCAATTATCTTCAATCAGT ACTGGAGAAGTCTGGGAATGCTGTTCCAACCGTCTATCCTATGGACATATATGCTCGTCTCTGTATGATTGACAGTCTTGAAAGGTTGGGTATTAATTAT CATTTCAAAGAGGAAATTCGAAGTGTGTTGGATGAGACACACAGATATTGGCTGCAAGGAGCAGAAGAAATATTCTTAGATCCCACTACCTGTGCAATGA CATTTCGTATATTGCGTCTCAATGGCTATGATGTTTCTTCAGACCCACTACATCAATATTTGGAAGAAAATTTTACCAATTCCTTGAAAGGGTACTTGAA GGATGTTGGTGCAGTACTGGAGCTATATAAGGCTTCACAAGTCATTATACATCCAGACGAGTCGGTTTTGGTGAGACTACGGTCGTGGACAAGAGATCTC CTGAGGCAGGAATCCTCCCCTCAACAAGTATATGCTGATAAACTTCGTAGTTATGTTGACCGTGAGGTCAAAGATGCTCTTGGTTTTCCTCATTATGCAA ATATGGAGCGTGTATTAAACAAGAGATCGATGGATCAATACAATGTAAAAGAAACAAGGATTTTAAAAACATCCTATAGATCTTGCAACCTCGCAAGCCA AGAATTTCTAAAGCTAGCTGTAGAAGACTTCAATATCTGCCAATCAATACATATTGAAGAGTTGAAACAAATGTCAAGGTGGGTTGTGGAGAGCAAGTTA GACACACTAAAATTTGCAAGGCAGAAAGTGGCCTATTGTTACTTCTCCGTTGCAGCCACACTTTTCACCCCCGAATTATCTGATGCCCGGATATCATGGG CGAAAAATGGGGTGCTCACAACAGTTGTTGATGATTTCTTTGATGTTGGGAGTTCTGAAGAAGAGCAGATGAACCTTATTCAACTAGTTGAGGAGTACAT TCCTGCTCTTAATTTGAAGTCTTCCATTTCTTGATTTCCATTTGAATTTTACCACAATTTCAATGCACAAACAATGATATTGAAATTGGAATGCAGGTGG GATGTAGACATCAACACTGCTTGTTGTTCTGAGAATGTTAAGATAGTATTTTCGGCACTTCACAGCACAATTTGTGAGATTGGAGAGAAATCAGTCAAGT GGCAAGGACGTAACGTGAAAAACAATGTTATCAAGATTGTGAGATGAATATTTATCTTTCTGCATATATTTTTCTTCCAATCTTCTATTGAGTTTCAAAT ACATCAATAAAAGTAAACCTTGGACTATACTTAGTTGTACACTTCCATGAGAATTTACGTTTTTTCATAAAGGCCTATTGATGTTTTCCCATTTAAGAAT TTTGCTTAGCTAAATGATTCTTTGTTTGCTTTGCAGTGGTTGAATTTGATACAGTCTATGTTTAGGGAAGCACAGTGGACCAGAACCAATACCGTCCCAA CAATCGATGATTATATGCAAAATGCATATGTATCATTTGCCTTAGGACCAATTGTCCTTCCGGCCCTCTATCTCATTGGACCTAAGCTTCCAGACGATGA TGCTGTAAATCATGAGTTGCATTGTATGTATGAGTCCATGAGCACGTCCGGGCGTCTCCTTAATGATATTCAAGGTTTTAAGAGAGAATCTGAGGAAGGG AAATTGAACGCAGTTTCTTTGCATATTATTAATGGCAATGGACTTATCACTGAAGAAGATGCTTCTGAGAAGTTGAAGGTTATCATTGAGGACAAGAGAA GAGAACTCCTGAAGTTAGTTTTGCAGGAAAAAGGCAGTGTAGTTCCAAGAGAATGCAAGGAAGCTTTCTGGAAAATGATAAAAGTGTTGAACCTATTTTA CATTAAGGATGATGGATTTACTTCACTTGAGATGCACTCTACTGTAAATGCTGTACTTAAAGAGCCTATTGTTCTTCAAGAATTGTTGGAAGGTGCCCAA CAAAATCTAGGTGTGTAATGACAAAGTTATAGTTGGAATTGCTCTTGAATGAAGACATTGTGAAATATGAATAAATTTGATGGCCATTATATTCAAAGTA CTCATTTGTTTTTGTACTACTAAGGTTATGCTTCACCTTTTGGGTAAATAATTAATCCATTTTGGAATACGTGACTATTCTTCTCAACAAGTG
• Tissue: pods
• Gene name: LI_gene_150599;
• Additional information: details;

Expression of Ll_transcript_309088

FPKM

• PAB: 0
• PNAB: 0.1
• PS1: 0.3
• PS2: 1.2
• PS3: 0.2
• PW1: 0
• PW2: 0
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_309088

• Blastp: Ent-kaur-16-ene synthase, chloroplastic from Cucurbita with 59.1% of identity
• Blastx: Ent-kaur-16-ene synthase, chloroplastic from Cucurbita with 55.83% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455519.1)
• Pfam: Prenyltransferase and squalene oxidase repeat (PF00432.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;