Id Trinity | TRINITY_DN47193_c0_g3_i1 |
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Name Transcript | Ll_transcript_311383 |
Sequence | TTCGTATAGACTCAGCTATGAACGCTTTCAACATGATTTTTTATTTTTCATTTCTCTCAGTCTTAGTCTTCACCTTCATCCAACCACCATCCCAATTCAC TCCTATTCCTATTCTTGTTCCAATTCCTATTCTTGTTCCTATTCCTATTCCTATTCCCCATTCCTATTCCAATTCTCAGGTTTAAAGATTCAACATATGA TGAAGGGGGCACTGTTCTTAATCTTGTTATCTTACTTCGTTTTCGTTACTCACGCCTTCTCCCAACAAATCTTCCCTGCAAATCTTGGTAGCACATTCGG TGGTGGAAGCTCTCATGAACCTAAATACAAGATTGAATTCCATCAACAACATTCACCTTTTCATCCTGATGATGATCAGGAATCTATTGTCATACCGGAT AAAAATGGACAGAAATTTATCTGTTACTTGCCTAAGGTGGAAAAGGAAAAAAGTGGAAAGCCTGTTATTCAGACCAATATTAGCAGCATGATTGTCGGAA CTGAGAAGAGGATTAAACAGAAGATGCCAGATGAACTGCTGGAAGTGTTAAAGGGTCCATGCTTTATCAGACAAGAAGGTTGGTGGTCATACGAATTTTG CTATCAAAAGAAGGTACGGCAAATACATTTGGAGGATGAGAAGGTGGTCCAGGAGTTTGTCTTGGGAGTGTATGATCCAGAGGCTACATCTGCCTTTAAC CAAAACCTTTCTGACATTTCTACATTGAAGGATCCCCGATCGAAAGATCTATCTCAAAGGTATCATGCTCACATATATACTAACGGAACCACATGTGATC TTACGAATAAACCACGAGAGACCGAGGTGAGGTTTGTATGCTCAGAGCCTAGAGCAATGATCAGTTCAATCACAGAGATTTCCACTTGCAAGTATGCACT TACTGTTCAATGCCCTACGTTATGCAAGCACCCATTGTTTCAAGAGGAGAGACCGGTGTGGCACACCATTGACTGTAATGTGCTTCCAAAGGATCACAAT GATGATAAAGTGAGACAAGAAAACAGAAATATGGAGATTGTTATGGTCACAGATTCTGAAGTTGATGATTCAGAACAATGACTTAGATACACACATGAGA ATGAAAGAAGGGAATAGAACAAGTTGTTAGCATGAAAGTATAGTTAAGATTCTGCATACATTTAATTTCCTTAGAAAAATCAAATTGTTAAGGTCACTAT TGTTTATAATGTTTCTGGTAAATGTCAGTGTTCATATTCAGAAGAAATTGCATTCTTCATGTGCATTATATCCACTATGTTTTGCAAAGTTAAATGCACT GAATGGTGAAAGCCAAAATCAAGTTACACAAGGCCATTTGCATGATTTTGGGGGTGTGCAAATTTGGACAGAAACAAGTGAATTACTTGTATGATTA BLAST |
Tissue | pods |
Gene name | LI_gene_150625; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_311383
Blastp | Protein OS-9 homolog from Arabidopsis with 59.04% of identity |
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Blastx | Protein OS-9 homolog from Arabidopsis with 59.04% of identity |
Eggnog | glycoprotein binding(ENOG410XR8A) |
Kegg | Link to kegg annotations (AT5G35080) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019416989.1) |
Pfam | Glucosidase II beta subunit-like protein (PF13015.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |