Id Trinity | TRINITY_DN47201_c0_g1_i21 |
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Name Transcript | Ll_transcript_385259 |
Sequence | GACTAAGCTATGTTTATTTGAACTCTAATATTTATCAAGAGTTTAACTTAAAACTACTTCAGATCACTTATAATGTATATGCTTGAACATGAGCTGAAAT AGCAACCCATGGAAGTAAACAACATGCATATCTTCTCTTCCTAACTGTTCAATTCCCTCCCACTTTTCTTTCATCAAAATATAGCTTAATTACCTCTTTC CTCTGGCTTTTGGGAGAAAGATCATAGCAGAAAAAGAGAACCATGTGGAAGCACTAAATGCATTAACTTCAGATTTTAAGCTACTACATTCTATGCATTA ATGTTTGCACAACTACTACGGTACTACCTCTACTCAACAATTCAAATAATGATATGAGAGGTTTTTTTCCATTGGATTCTTCATATGTGCTAATTGCTGA ATAGAACTTCAACCTTCATCATGGGGTTTCATTACTTGGTTTTGTTATTCTGTTCTATTTGGTTAGTCTTTTCTATGAGTAGATGTAGTTCTCAATTGCA ATCTTCTCAGACTGAAGTGCTTCTTCAGTTGAAAAAGCACTTGGAGTATCCAAAACAATTGGAAATATGGAAAGATAGATGGACAGAACTTTGCACTATA TCTTCTTCTGCACACGTGAATGTTTCATGCAAGGATAATTATGTCATTGGCCTCATCATTTTGGGTGATAAACCAACCCAAGTTAGAGATTTTGATGGGT TTGCTATTCCAAATCAAACACTATCACAAAGCTTCTCTGTGGATTCCTTTGTTGCCACTCTTGCAAGGTTAACTAACCTGAAAGTTCTTTCTCTTGTTTC TTTGGGCATTTGGGGGCCACTCCCTGATAGAATTCATAGACTCTTTGCACTTGAACATTTGGACTTGAGTTCTAACTATCTTTATGGATCAATCCCTCCG AAGATTTCGACATTGGTGAATCTTAAAACTCTTACATTGGGTGATAACTTCTTCAATGAAACCATGTCAAAGTTGTTTAACTCATCAAGTAATCTTAAAG TTCTTATTTTGAAGAATAACAGGTTGAAAGGTCCATTTCCATCTTCAATCTTTAGCATCACCACCCTCACTTACATTGACATGTCAAGAAATCAAATATC AGGTAGCTTGCAAGGTTTCACTGGTTTAAGTAGTTTGGAACAGTTAGACTTAAGCAATAATAGATTCGACTCGTCGCTACCCTCAATGCCGAAAGCGTTG ACAAGGTTTTCCCTAAGCAGAAACTCCTTCTCAGGTGATATTCCCAAGCACTATGGTCAACTAATTAATCTTCAGCAGCTTGATGTTTCCTTCAATTCAC TCACAGGCACTGCTCCTGCTGAAATTTTCGCTTTGCCAAACATCACTAACTTGAATTTCGCATCCAACATGTTAAATGGCTCACTCCAAAATCACATAAT GTGCAGCAACCAACTTAAATTTGTTGACGTATCAAACAATAAGTTAGTGGGGGTTTTGCCTTATTGTATGAGCAATAAGTCAGAAAATAGAGTTGTTAAG AGTGATGGAAATTGTTTATCTGGGAATGTGCAGCATCAGAATGCAGTACCCTACTGCACAGAATCTCATGTTATGAAGAAATCATACAAAGTTGGAATTT TTGTTGGTGCCATTGTGGGAGTTCTTATGATCATTGTGGTTTTGACCTTGTGCATTATTGTGGCTTGGAGAAGATATTTCACCGGGGGGATGCAAGAGCA GCATCTATTGCATAAAACAGTTCAAGATAACTACTCATCAGGGTTCTGCTCTGATCTTGTAACAAATGCAAGTAGGTTGTGTTTGTCTATCAAATAACAA AAATCATGGGTTGAAGGACATGAACAATGACTGCGATGTTTCTTATTTTTGGTTACTAATTTCAGGGTATGTTTCTGAAACTGCGAAGTTAGGCAGAGAA GGCTTTCCGGCGTGTCGATCATATTCATTGGAAGAGCTAAAGGAAGCCACAAATAATTTTGACAACTCTACATTTACGGGGGAAAATTTATATGGGAAGC TTTACAAAGGAAAACTGGAGAGTGGGATTCAAGTTGTAATAAGGTGCTTGCCTCTATCCAAAAAATATTCGATTCGGAATTTCAAACTGAGGTTGGACTT GCTTGCAAAGCTTCGTCACCCGAATTTGATGTCCCTCTTGGGGCACTGCATTGATGGTGTTATAGGAGAGCATAATGACACAAAGGTTTATCTGGTTTAT GAATGTGTATCAAATGGGAGTTTTCAGACTTATCTCTCAGGAAACAGTTCTGGCAAGATTTTTAATTGGTCAGAGAGGTTATCAGTTCTAATTAGTATTG CCAAAGCTGTCCACTTCCTACACACTGGAATGATACCTGGTTTCTTCAAAAACAGGCTTAAGATAAACAATATCTTGCTTAATGAGCATTGGATAGCAAA GTTGAGTGACTATGGATTGTCCATTATCTCAGAAGAAACTGATGCATGTGGGGTAACTGGAGAAAGTCCTAATTCATGGCAAATGAAAAAGTTAGAGGAT GATGTTTATAGCTTTGGATTCATACTACTTGAGGCACTTGTTGGACCTTCAGGGTCTTCTAAAAGAGAAGCAGCTTTGCTGAATGCAATGGCATCTTTTA GTAGTCACCAAGATGGCTGGAAACAGATTGTGGACCCAGTTGTGCAAGCTACTTGCTGTAAAGAATCTGTGTTTATTGTGATTTCAATAACAAACAAAAT TATTTCCCCCGAGTCCTGGAGCCGACCATCGATCGAAGATGTCCTCTGGAACTTGCAGTATGCTTCTCAAGTCCAAGCAACAGCTGATGGGGATTAGAGA ATTTGACTCATAGTCAAGCTGCTCCAAAAAGATAACCACTACTCAACATTTCAAGTTTTGAATTTCTTATAAAGGGTAAGAAAGCATTGGTTGCATATCC TCTATTTTGTCAACTAAAAGATTGCTTGAATCATGTAATGTGAAAAACCTCTAGTTTGTATATTGATTAATGTAATATTGAAGAATCAACTACAATGTAT TTATAGAAGGATTAGATTTCTTGAACAGCAAGAAACCCTTCTATAACTAACTATAACAAAAAATACAAGTAAATTAGCACATGGTAAAATGAAATAAGAC ATGTACTAAATGTGAAACATGTGATAAATGAGGTGTGCCCAGCTGGAACAACATTCTGTTGCGAAGGAATGTGCGCCATGGGCCAGGGGTCACGCATCAG CCATGTGCGCCACATGCATCAGCTATGTGCGCCAAGGTCAAACATATGTGCATCAGCCAAGCGCCACAGTCAGAAACTCATGCGCACCAAGTATGTGCAC CAGAACCGTAGTCAGGCCTATGCACATGCCCATATGCCACGGTCATAAATCCATGCGCACCAAGCTCATGTGCTACGGTCAGGGCGATGCTCATGCGCAA CGGTCAGGGCGATGCTCATGTGCTACGGTCAGGGCGATGCTCATGCGCAACGGTCAGGGCGATGCTCATGTGCTACGGTCAGGGCG BLAST |
Tissue | pods |
Gene name | LI_gene_150688; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385259
Blastp | Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 from Arabidopsis with 33.8% of identity |
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Blastx | Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 from Arabidopsis with 41.75% of identity |
Eggnog | inactive leucine-rich repeat receptor-like protein kinase(ENOG410XPGM) |
Kegg | Link to kegg annotations (AT3G03770) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417686.1) |
Pfam | Leucine Rich Repeat (PF00560.32) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |