| Id Trinity | TRINITY_DN47205_c2_g3_i10 |
|---|---|
| Name Transcript | Ll_transcript_385398 |
| Sequence | CCTACTTGTCAGCAAACCCAACATAAAAGAGATGACATGTCTTTGATCGCCTCCGAAGAAAGAATAAGAAGAATAAGAAGAAGAAGAAAGTGAAGAAAGA AAATGATGCAAAGCAGAATAAGGAGGAGTGTATCGTTGTTTCGAAGATCACTACTTCACAGTAACAATGCTAAATACTCTTCTTCTTCTTCTTCTTATGG TGTTGATGAGATTCTCGATAATGAGGTATTGGTAGAAGGAATTGGATACACGCGAATGGCTATTCTCAATAGACCCTCTGCTCTTAATGCTATCAACACA AACATGGCCACTAGGTTGCATCAATTTTATAGAACATGGGAAGATAACTCTCACATTGGTTTTCTCATGATTAAGGGCAGTGGCCGGGCATTTGCAGCTG GAGGAGACATTGTTGCACTTTATCATATGATAAAGCAAGGGAACATGGAAGCGTGTAAAGAATTTTTTAGAACAATATACAGTTTTATATATCTCATAGG TACATATATGAAGCCACATGTTGCTCTTCTGAATGGCATTACCATGGGTGGTGGGGCAGGAGTTTCAATCCCTGGGACATTCCGGGTTGCAACAGACAAA ACTATTTTCGCGACACCTGAAGTTCTTATTGGATTCCACCCGGATGCTGGAGCATCCTTTTATCTTTCACACCTGCCTGGTCACTTAGGTGAGTACTTGG CTCTGACAGGGGAAAAACTCAATGGGGTAGAGATGGTTACCTGCGGGCTTGCTACACACTACACACTAACTGCACGGCTCCCGTTAATCGAAGAACAGCT GGGGAGATTGGTTACTGACGATCCGTCAGTCATTGAAACCACTTTAGAGCAGTATGGTGACCTTGTTCACCCAGACAGCAGAAGCGTACTTCAAAGAATT GAAATTGTTGATAAATGCTTTGGCCTTGACACAGTTGAAGAGATTGTTGATGCTTTGGAAGTTGCGGCAAGTGAAACAAAAGATGCATGGTGCATTTCTA CCTTAAATAGACTCAAAGAAGCTTGTCCATTGAGCTTGAAGGTTTCATTGAGATCTATACGAGAAGGTAGATTTCAGACCTTTGACCAGTGCTTGTCACG TGAGTACCGCATGACTTTACAAGGAATATCTAAGCAGATATCTGGTGACTATTGTGAGGGAGTAAGAGCACGTGTAATAGACAAGGACATGGCACCAAAG GTACCAATTGTTTTGCATAACCTTCTCAAACTGAAATTTTTTGTCCAAGTATTGATATGTCATTTCTCTACGAGACCCATTTTACTACACTTTTTCAAGA GGGGAAATTGTATCTAGCTCCTTCAAAATTTAACTCTTGCAAGTTACCACAAAGAACTTTATTTTTTTTTAAAGTAGTCCTTAAACTTTAGTCAGTCTTC TAATAATAGACCATTCTATTGAATCTGGACATGTTAATTGATTAATAATGACACTACATGGCAATATCAACTTTTGATTAATAAATTAGTAAATAGTGTG ATTTATTGTAAATGCTTAGACAAGATGTTGCAGTTAGTGTTATCCTTAATTAATTAAGAGGTGCTAAATGAAAGGGTTTATTAGGATATTTAGTTAAAGT TTAGGGGTTAATTGAGAATATTAGTTCATGGTGGTAATTTGCAAACAGTATTTTTCTCCAACATTACCTTTTACACCTTATCTTTCTTTAAGTTCAAGAG ACTTGCACTCTTTCCTCTTTTCAGGATTTATAATTACTTGGCTTAATGTAATTCTTCATTGAGAAGAAATTTATGCAATGGTTATTTTTTCCTATCTATC TTTAAAAGCTATATTTGAAATCCAAATATTTACTTAATAATCTATTGCAGTGGGATCCTCCA BLAST |
| Tissue | pods |
| Gene name | LI_gene_150730; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385398
| Blastp | 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial from Arabidopsis with 57.44% of identity |
|---|---|
| Blastx | 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial from Arabidopsis with 59.27% of identity |
| Eggnog | Enoyl-CoA hydratase(COG1024) |
| Kegg | Link to kegg annotations (AT4G31810) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413106.1) |
| Pfam | Enoyl-CoA hydratase/isomerase (PF16113.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |