Id Trinity | TRINITY_DN47205_c2_g3_i3 |
---|---|
Name Transcript | Ll_transcript_385383 |
Sequence | CCTACTTGTCAGCAAACCCAACATAAAAGAGATGACATGTCTTTGATCGCCTCCGAAGAAAGAATAAGAAGAATAAGAAGAAGAAGAAAGTGAAGAAAGA AAATGATGCAAAGCAGAATAAGGAGGAGTGTATCGTTGTTTCGAAGATCACTACTTCACAGTAACAATGCTAAATACTCTTCTTCTTCTTCTTCTTATGG TGTTGATGAGATTCTCGATAATGAGGTATTGGTAGAAGGAATTGGATACACGCGAATGGCTATTCTCAATAGACCCTCTGCTCTTAATGCTATCAACACA AACATGGCCACTAGGTTGCATCAATTTTATAGAACATGGGAAGATAACTCTCACATTGGTTTTCTCATGATTAAGACATGACGAATGAGTACGATTCTAA GTATTGGTTGAGTCTAATTTTTGAACACGAGTACGATTGTAGATCCGGTGAAACCTGATTATGATTGGGTAGAATCAGTGGCCGGGCATTTGCAGCTGGA GGAGACATTGTTGCACTTTATCATATGATAAAGCAAGGTCAAAATTATTATGACTTAGTTTCGTGCTTCTAAATTGCATGTTTATTCATTCACTATGTTT TCAAAATGATCTCTGATTCCTTCAACATATTTGAATTTGATAATATTTGTTTCCTCTTGTCACTTGTTTACATTTTTTGTTATGTTTGAAGAGCTTAGAA AAGTTAAGGGTTCTTTTCGGGAATATTGCATAAGGGAGGAGGAGGCATATTTTTAACATTTTGTGGAAAACAACACCCAACTTCAAAACATGACCTTGTT CATTAGTTCTTAGGCATATTGTTTCTGTTTTATTTATTTATTTTGAAATGATAGTTTAAGAGAAACTGTAGGTTGGATCCATGCTTCAGGTTCTATATTT TCATAATTTGGTTTCAGTTATTTTCTTTCTTCTATTTTAAATGTATCGTTTTCTACTGCATTTTAGTTACTGTAGTTTTCTGTTTCTTCCAATTTATGCA GGGAACATGGAAGCGTGTAAAGAATTTTTTAGAACAATATACAGTTTTATATATCTCATAGGTACATATATGAAGCCACATGTTGCTCTTCTGAATGGCA TTACCATGGGTGGTGGGGCAGGAGTTTCAATCCCTGGGACATTCCGGGTTGCAACAGACAAAACTATTTTCGCGACACCTGAAGTTCTTATTGGATTCCA CCCGGATGCTGGAGCATCCTTTTATCTTTCACACCTGCCTGGTCACTTAGGTGAGTACTTGGCTCTGACAGGGGAAAAACTCAATGGGGTAGAGATGGTT ACCTGCGGGCTTGCTACACACTACACACTAACTGCACGGCTCCCGTTAATCGAAGAACAGCTGGGGAGATTGGTTACTGACGATCCGTCAGTCATTGAAA CCACTTTAGAGCAGTATGGTGACCTTGTTCACCCAGACAGCAGAAGCGTACTTCAAAGAATTGAAATTGTTGATAAATGCTTTGGCCTTGACACAGTTGA AGAGATTGTTGATGCTTTGGAAGTTGCGGCAAGTGAAACAAAAGATGCATGGTGCATTTCTACCTTAAATAGACTCAAAGAAGCTTGTCCATTGAGCTTG AAGGTTTCATTGAGATCTATACGAGAAGGTAGATTTCAGACCTTTGACCAGTGCTTGTCACGTGAGTACCGCATGACTTTACAAGGAATATCTAAGCAGA TATCTGGTGACTATTGTGAGGGAGTAAGAGCACGTGTAATAGACAAGGACATGGCACCAAAGTGGGATCCTCCAACCCTGGAAAAGGTATCTCAGGATAT GGTGGATCAGTACTTCTTACCTCTAAGTGAATTTGAACCTGATCTAGAGCTACCAACAAAAATTCGAGAAGCATTTTCCTAGTTTCCTTTTTTCTTTTGA AGTGTTTCCTGAAGTGGACAAATAGATATACAGCAATTGTATTTTGCAGGGCATTGGTGAAGGTTGTACTTAAAACATATATAGGTTGTACCAGCTTTGT GTTGTGTTGGTATTCACCAACAGATATATGCACATGAACAAAGTCTTGTTCTTCCTGAATTTCCATTAATTTATTTAATAAATGAGATGATCTCTATGGT AAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_150730; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385383
Blastp | 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial from Arabidopsis with 64.57% of identity |
---|---|
Blastx | 3-hydroxyisobutyryl-CoA hydrolase-like protein 2, mitochondrial from Arabidopsis with 65% of identity |
Eggnog | Enoyl-CoA hydratase(COG1024) |
Kegg | Link to kegg annotations (AT4G31810) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413106.1) |
Pfam | Enoyl-CoA hydratase/isomerase (PF16113.4) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |