Ll_transcript_385650

• Id Trinity: TRINITY_DN47208_c1_g3_i19
• Name Transcript: Ll_transcript_385650
• Sequence: GTAAAATTAACGTGAAAGAAGAGCGCGTGAATGCGAGAGTAACAATAAGAGTAGAAGATGAATGAAATGGAATGATTCTTTTCTCTACTACTACTCCTTC TTTCTCTCAATCTTATTACAAACAACAATAATCTCTCTTCTCTCTTCTTCATCAACCATTTCAGGAATTGAACACTTGATGTTTTAGTCATCCTGGGGAT CAAGTAGGTCTTACGCAACTAGACGAACGCCAATTTGAACTCTGATGAGTTGCAATTAGGTTTTTGTGTGTGTGTTTTTAATCGATTAAATGTTAATGAT TGTCAATTCAAATTGGGTTGGAATTAGGATTTTACTGTCTGGTATCCAATTGTTAAGTGGTTTAAGATTTTTACCATTCGTATATTGAAATTTCATGTTT TTGTTGGTCTGAATTTATGATTTGTTTGGTGTTGTGGATGCAATGTGTTTTTGGGGATGAATTGTGTATGATTGAGAGAAAGTTTGAGTTTTTTGAGTGG TTCTGTTGAAAATTGTGGATTTGAGTTTTATCCTTTCTCCTCATTTTTTTTTGTTTTTTTGTTTTTACTTTTTGTGTTTTTGCATTTGTGTTTGAATTGA TCATAAAACTCTGCAGGGATTTTGATACACGTATAGCAGATAGGGTGTTGTTTTCTTTGGGTCTGTTGATTGTACTGTATATATGGTATTAGGCTGAATT TATGATTTGTTTTCCATGAAGTACCAATACTATAATATGGTTGCCGTAACGGTATATAATAACTCTTTAATAAGATGCTTCAGTATTTTTAGATACTTTT GGTGTACATGTCTTTTAATTATTTTATGAATTTTTTCGCATCGATATATCCAGTATGTGTTTCCCAGATATTTTTTGCTTTTTTTTGTTTAGTGCTGTGG AAGCAATGGATTTTGGTGAAGAATTATGTGAAGTCAAGAGAAAGTTGGAGTTTTTGAGTGATTCTGTTGAAAATTGTGGCCTTAGGGGTTTTATTTCTTG TTCTCATGTGTACACATTTTGGTGTTATTGCTTATGTGTTTGAATTCTGCATAAACTTCTGCTGGACTTTCAGGATATGCATCTCAGTGTCTCCAACAAT GCCAGTGAATTGAGCAGAAAGAGTGTTATTTTCTTTGGGTCTGTCGATTGTATTGTATATAGCGGATACTTTTCTGATGTGGAAAAGTGAGTAGTTTTTG TGAAGAATGATTGGTTTTTTTATCTGTTGTTGTATTGCTTTATTTTGTTGAAGAATTCAAAACATATTTGTCAAAACAAGAACTGTATTTTGTTGGATGG GTAATAAATTTGGGAAGAGGAGCCATGTAATAGATGAAAAATATACGAGGCCACAAGGGCTGTATAGTCATAAAGATGTGGATCATAAGAAGCTGAGGAA GCTAATACTTGAATCAAAGCTTGCACCTTGTTTTCCTGGAGATGAAGAAAACACCCATGACCATGAAGAGTGCCCAATTTGCTTTCTGTATTATCCAAGT CTAAACCGATCAAGATGTTGCATGAAGAGCATTTGTACAGAGTGCTTTTTGCAGATGAAAGTTCCAAATTCAACTCGACCCACACAATGTCCCTTCTGCA AAACACTAAACTATGCTGTGGAGTATCGTGGTGTGAAAACGAAAGAAGAAAAGGGATTGGAGCAGATAGAAGAGCAACGTGTTATAGAAGCAAAAATTAG GATGCGGCAGCAGGAACTTCTTGATGAAGAGGAAAGAATGAATAGAAGACAAGAAGTGAGTTCTAGAAATATGAATGTGGAAGTTGCAGATGTTGAATAC AGCTCAAACGCAGTGGCTGCATCTTCAATTTCTGTTGTTGAACATGAGGAAATAGTTTCTTCTCCAGATTCATGTACCACCTCAATGGTTAGACCACCTC CATCTGCTAGAACCAATAGAGATGATGAATTTGATGTCGATCTTGAGGACATTATGGTTATGGAAGCAATCTGGCTTTCTATTCAGGTGAAAATATCTGT CTGAATAATGTCATCTATAGCTATTGAACATTAAAGTCATAATTAGAATGAAAGATCCCCTCTGTTGCAATAAGTGGTCTGCAACTTTTTTTGAAATTTT TAGCCATGTCATAGGTTTGTTATCCCGGGCCTAGTTCAATCTATAATGTGAAATTGCTTGTTTTCATTTTATTTTGCTCCAGTTTTGTAAGACAGTGATG AAAGTAAATAAATAGATTATTCTAAAGGAGTGCAAAATTTCTTTCACGAGAATGAAAAAAATGTATGATGTTTAGATTTGAGCTTGGTCCTCATCTTTTG AACGGTGATATAAATGTTAACTCCTAGATAACAGCAAAAGAAAAGTCTTTGCGTTTAAACTTCGTTGTGTTTTAGGTAATAATCAAATTATTCAATATAA CTCGTTAGTTTAAGCCTTGAAGTGAAGAGTGTTTAGAGGAAAAAAGTAGGGGAACTGTTCGAACTCACAAGAACTAAGAACAGCAGAAAAGAAAAAGAAA AAAAAAGTGGAGAATGATTCAAAAAGAGCAGCAGCAACATGGAACCACACCCATATGGAACGCTTTATCCTGCCACGAACACAGAAAGCATTGGCCTCCC TCAATTTGAGAATGGTAGGCAAAGAAATTTATCATTTGCTGATGCTACTCCTGGACAATACATAGGCAATAATCGCAGTGTTTCATCTGTTGTGAGTCAA AAGACTGAATCATCCTCTTCTCCATCTGGGGGTCTTGCTTGTGCCATTGCAGCTCTTGCTGAGCGCCAGCAAACGGCTGGAGAATCATCTATGAGCTCCT CCAGTGAAAATACAACATCGTTAAACATGCTACAAGGTTCCAGAAGGTTTTATAACAGACTTCGTAGAGATATGGTTAGTTATCCGCCCATAGACAACCT CAATGAGGTGCAACCAGATGATTCTGTTGCTATGGCAAGGGGTCATAGTGAATGGAGCATGGAGCATAGACCACAGGTGGATGAAACAGCAACTAGTTAT GAAAGCTCTGTCGTAGCTGCAGCAGATATTGTCGAACTATCTTCTTTACCACAGTCTAATGAAATTGATGGCAGCCTACAATGTGCCACAAACCCCATTA TTCCTGAAACTTTTGAGGAGCAGATGATGCTAGCTATGGCTGTTTCGTTAGCTGAAGCTCGAGCTATGTCAAGTGGACAGGGTGCTTCTTAGCCGTAGTT TTTCTTCGAGGTAATTTAAATTATGATCCTTGCTGTGGCTATATGGTTAGCCGAATCCTGGATTAGGAGTTTGACCCAAGTTCTATGTGTGCAATTTGTT CAAGGATCAGGTAGTGATTCTCTTCTCACACCAATTTTTATATATACAGATGTCAAAGGAAAACCAGCTATCCTAGCCGGTAAAAGGTTGCTGCTTATGT CTTTTTTTATTCAAAAAAGAAGAAAGAAAACTGTGTTTGATCTTTGATATTCTCTCTATGTCATCTTATTAGTTTTTTGTACATAGAGTTATTTTTAAGT TTCAATAGTTGATGTAAAATCTCTTTTCATTGTTATGGTAATATGTGTCACACTTTAGGCATATTATTGAACAAGAAAAAGAATTTAAATTTTCTTGTCA G
• Tissue: pods
• Gene name: LI_gene_150745;
• Additional information: details;

Expression of Ll_transcript_385650

FPKM

• PAB: 3.8
• PNAB: 1.3
• PS1: 1.5
• PS2: 1.3
• PS3: 1.2
• PW1: 1.3
• PW2: 1.8
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_385650

• Blastp: Protein SIP5 from Eremothecium with 34.51% of identity
• Blastx: Protein SIP5 from Meyerozyma with 43.59% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AGOS_ADR255W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430026.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;