| Id Trinity | TRINITY_DN47208_c1_g3_i23 |
|---|---|
| Name Transcript | Ll_transcript_385654 |
| Sequence | GTAAAATTAACGTGAAAGAAGAGCGCGTGAATGCGAGAGTAACAATAAGAGTAGAAGATGAATGAAATGGAATGATTCTTTTCTCTACTACTACTCCTTC TTTCTCTCAATCTTATTACAAACAACAATAATCTCTCTTCTCTCTTCTTCATCAACCATTTCAGGTTCCTTTCTCATTCCACCTTTTTATTTCTCAATCT TTCTTTTCTTCCTTTTCTATTGCAATTTTTTTTCTTTTTTTCATTTTACCATTGATTTTGTTACTCTATTTTTTGGTACTACCGAAAGTATCCTGTCAGT ATGCTGACTGTCCATTTCAACAATTGTCGTTATCAGGAATTGAACACTTGATGTTTTAGTCATCCTGGGGATCAAGTAGGTCTTACGCAACTAGACGAAC GCCAATTTGAACTCTGATGAGTTGCAATTAGGATATGCATCTCAGTGTCTCCAACAATGCCAGTGAATTGAGCAGAAAGAGTGTTATTTTCTTTGGGTCT GTCGATTGTATTGTATATAGCGGATACTTTTCTGATGTGGAAAAGTGAGTAGTTTTTGTGAAGAATGATTGGTTTTTTTATCTGTTGTTGTATTGCTTTA TTTTGTTGAAGAATTCAAAACATATTTGTCAAAACAAGAACTGTATTTTGTTGGATGGGTAATAAATTTGGGAAGAGGAGCCATGTAATAGATGAAAAAT ATACGAGGCCACAAGGGCTGTATAGTCATAAAGATGTGGATCATAAGAAGCTGAGGAAGCTAATACTTGAATCAAAGCTTGCACCTTGTTTTCCTGGAGA TGAAGAAAACACCCATGACCATGAAGAGTGCCCAATTTGCTTTCTGTATTATCCAAGTCTAAACCGATCAAGATGTTGCATGAAGAGCATTTGTACAGAG TGCTTTTTGCAGATGAAAGTTCCAAATTCAACTCGACCCACACAATGTCCCTTCTGCAAAACACTAAACTATGCTGTGGAGTATCGTGGTGTGAAAACGA AAGAAGAAAAGGGATTGGAGCAGATAGAAGAGCAACGTGTTATAGAAGCAAAAATTAGGATGCGGCAGCAGGAACTTCTTGATGAAGAGGAAAGAATGAA TAGAAGACAAGAAGTGAGTTCTAGAAATATGAATGTGGAAGTTGCAGATGTTGAATACAGCTCAAACGCAGTGGCTGCATCTTCAATTTCTGTTGTTGAA CATGAGGAAATAGTTTCTTCTCCAGATTCATGTACCACCTCAATGGTTAGACCACCTCCATCTGCTAGAACCAATAGGTATGCTAGCTCTCTTTGCTTTT TCCCCACATTTTGTTGTTATGTCTTATTTTTTTGTTTTCAATTTGTGTTACTAAATATCGAAAATTAGGTGCGATCATACCAATATTAATGCATCAGATC CCATTAGAACTCTTCAGTTAAGTGTGCTTGGTCGAGAATAGTACTAGGATGGGTGACCTCATGGGAATTCCTCGTGTTCACCTCTTTTAAAAAAGAGAGT GAGTTTGATGCAATAATAAGGCTGCGTACATTTACCCTCCCCAAACCCTACTAAGTGAGAGCCTCGTCCACCGGGCCACCCTTTTTAATGTGGGGGGAAT GGGTTAACATGTCTAATTGCTGAAAAGGCGTATGAAGAGTCCATTTCTACTAGTACTTAATCAATTTCCAATAATATCCCCCATCCATGGATCATTTCTT AGGTGAATTATCAGTACAATTGATGACAGAATATGTACATATTAGTTTGTTTGGTAGTATTGGAACTATATAGGCCCTTTCATGCACACACCTGTTAACA TGCATGGTCCAGGCAGTGAAGTTTGAATGAAGCATGGATACTTAAATTGTTGCCATAACCCATATTGGTATTTGATATTCCTAGCCTGCATGTCTGCATG AGTTTTTTTTTTTTACTTCTGTGAATGATAGGCTTCTATAGTGTCTACAATGATAAACATGAGTCTGTGGATCCAACTCGATGCTATTATTGTTACTAAT ATATTTGTTTATTTTTAAATTCTTAGTTCAAGATAAAAACTCCATTCACTACTTCAATGCAATCATACGTTGGCTAATTATTCTTATTAATTTGTTTATG ATAGTTTTATATTCTTATGACATGTTATATATAATATTTGATGGAAAGTTTGATGCGGATTCCTTTAGGAGACCCCACGATAGGGAGAGGCCCAGGATCA CTAGAGTTTATGAGAGGAGAGGCAGTGGG BLAST |
| Tissue | pods |
| Gene name | LI_gene_150745; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385654
| Blastp | Protein SIP5 from Eremothecium with 34.51% of identity |
|---|---|
| Blastx | Protein SIP5 from Meyerozyma with 43.59% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AGOS_ADR255W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430027.1) |
| Pfam | - |
| Rfam | 5S_rRNA (RF00001) |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |