Ll_transcript_385656

• Id Trinity: TRINITY_DN47208_c1_g3_i24
• Name Transcript: Ll_transcript_385656
• Sequence: GTAAAATTAACGTGAAAGAAGAGCGCGTGAATGCGAGAGTAACAATAAGAGTAGAAGATGAATGAAATGGAATGATTCTTTTCTCTACTACTACTCCTTC TTTCTCTCAATCTTATTACAAACAACAATAATCTCTCTTCTCTCTTCTTCATCAACCATTTCAGTGCTGTGGAAGCAATGGATTTTGGTGAAGAATTATG TGAAGTCAAGAGAAAGTTGGAGTTTTTGAGTGATTCTGTTGAAAATTGTGGCCTTAGGGGTTTTATTTCTTGTTCTCATGTGTACACATTTTGGTGTTAT TGCTTATGTGTTTGAATTCTGCATAAACTTCTGCTGGACTTTCAGGATATGCATCTCAGTGTCTCCAACAATGCCAGTGAATTGAGCAGAAAGAGTGTTA TTTTCTTTGGGTCTGTCGATTGTATTGTATATAGCGGATACTTTTCTGATGTGGAAAAGTGAGTAGTTTTTGTGAAGAATGATTGGTTTTTTTATCTGTT GTTGTATTGCTTTATTTTGTTGAAGAATTCAAAACATATTTGTCAAAACAAGAACTGTATTTTGTTGGATGGGTAATAAATTTGGGAAGAGGAGCCATGT AATAGATGAAAAATATACGAGGCCACAAGGGCTGTATAGTCATAAAGATGTGGATCATAAGAAGCTGAGGAAGCTAATACTTGAATCAAAGCTTGCACCT TGTTTTCCTGGAGATGAAGAAAACACCCATGACCATGAAGAGTGCCCAATTTGCTTTCTGTATTATCCAAGTCTAAACCGATCAAGATGTTGCATGAAGA GCATTTGTACAGAGTGCTTTTTGCAGATGAAAGTTCCAAATTCAACTCGACCCACACAATGTCCCTTCTGCAAAACACTAAACTATGCTGTGGAGTATCG TGGTGTGAAAACGAAAGAAGAAAAGGGATTGGAGCAGATAGAAGAGCAACGTGTTATAGAAGCAAAAATTAGGATGCGGCAGCAGGAACTTCTTGATGAA GAGGAAAGAATGAATAGAAGACAAGAAGTGAGTTCTAGAAATATGAATGTGGAAGTTGCAGATGTTGAATACAGCTCAAACGCAGTGGCTGCATCTTCAA TTTCTGTTGTTGAACATGAGGAAATAGTTTCTTCTCCAGATTCATGTACCACCTCAATGGTTAGACCACCTCCATCTGCTAGAACCAATAGAGATGATGA ATTTGATGTCGATCTTGAGGACATCATGGTCATGGAAGCAATCTGGCTTTCCATTCAGGTGAAGACAATTGTTTGAATATTCTCATCTATAAGCTATTGA GCATTAAAATGGAAGATCACCTCTCTGTTGCAATAAAGTGGTGTAACACTCGTTTTGAAATTTTTAACCACACTATAAGTTGTTTTTGTTGGCCCTAGTT CAATCAAATTTAAAATTGTTTGTTTTTAGTTTATCTTTCTCTAGTTCTCTAAGACAATGATGAAATTAAAAGAAGATAAATGGTAACTCCTAAATAACAG CAGAAAATATATTTTTTTACATTTAAACTTCGACATTTTTTAGGTAGAATAGTTCATACTTCAGATATGAATACTTACTAAAGTAAATAACTTTCAATAT ATATGCCCATGCTGTGCACTTATAGTTTGCCTTGTGTTACTTTGCCCTGTGATAGTCAGGGAAACATGTAGTGAGAGGAAGCCTTGGCCTCCCTCAAATT TTTAAAATCTATATTTGACATTTTTTTTATTTTCTATTTTATTTTTTTCACGAACTTGGTCGTCCTCGTATCATGGTATGTCTTATGGCCTAGTTCCCTC TCATATTCATGTGTGTCTATATCCTATGACTTTCAAGGGGCCCTTATTTTAAAATATAGATCCCTTTTCTTAATCTATAAAATCATGATTGTGTGAATTA CTTAGTGCCTTTGGAAAGCTCCAAAGAATAATTTGGGCAAAATCTTGGGATTCTAAAAGGGGAATGAAAGTTGCCTTTGATGGTCTTTAATGTAAATCAC AATATGACATGGCTATAAATTATGATAATAAGACACACACCCTCACATCTGTATACCTAGACCAACTAGGTAACTCATGCTTAATCTGTGTAGGAAAAAA TAAAATGAAGTTACTCATGTATAAGTATTTATCAGTTCTTATGCCTTAAGTTTGAATATGAGTTAGCATCTTGTTAACTTGTAATAGCTCTTCAAACAAA AGTTTCATTGTTTATTATAGTATGATTTTGGGCAACCTTTAAATTTCTTGGTAAAAGAACCATATTGTGCAATCCAACTCTTCGCTTTATTTTATCTTGG CTTGCATGGCCTGTTTATTTGATGATTTTGATTGACTCAATATATGAATTACATAACTACAGGAGAACGAGAGGCAGGGGTATTTATCATCTGCAGATGC TACTCCTGGACAAGACATAGCCGATAATCACTGTACTTCATCTGTCATAGGTCCACAAACTGGATCATCCTCATCTCCGTCTGGGGGTCTTGCTTGTGCC ATTGCAGCTCTTGCTGAGCGTCAGCAAACGGCTGAAGAGTCATCTACGAGCTCCTCCAATGAAAACACATCACCTTCCAACATGCTACAAGGTTCTAGAA GGTATTATAACAGGCTTGGTAGAGATAAGGTTAGTTATCCGCATACAGAAAACCTCAATGAGGTGCCACCAGATGATTCTGTGGCTATGGCTAGCGGACA TAGTGAATGGAACATAGATCATGGACCACAAGTGGCCGAAACAGGAACTAGCTATGCAAGCTCTGTTGCTGCAGCAGATGGTTGCGAATCATCGTCTTTG CCACAGTCAAACGAAATTGTTGACAGCATTCAAGGTGCCACAAATCCTGTTGTTCCTGAAAGTTTTGAGGAGCAGATGATGCTAGCTATGGCTGTCTCTT TAGCTGAAGCTCGAGCTATGTCAAGTGGGCAGGGTGCTTCTTGGCAATAGTTTTTGGTCGAGATGCTCATCTAATCGTTCGTAAATCAATGATGCTTGCT ATAACTATTTGGCTAGCTGAGTCCTGCATCAGGAGTTTGAGCCAATATCACGTCTGCAATTTGTTCAAGGATCAGGTGGTGATTCTCCCCTCACACGAAT TTATATATATAGATGTGAAAGGAAAATTAGTGATCCTAACCAGTAAAAGATTGCTGCTTATGCCATTATTTTCCTGGAGAAAGAAAGTTGTGTTTGATCT TTGATAGTCTCTCCTGCAGTCTCATTAGTTTTCTGTAAATAGTTATTTTTAAGTTTCAATATTGATGACAAATTTGAGTTCATTCTTATGGTAATATGTG GAACACTAGAGTCATATACTGAACAAGAAATTAAATTGTCATGTCAGTGAAATTTTTGTCTAGTTCTATCCTTCAGTTATGATATGTTGAAGTTATTGCC TAAGCAGGGCACTCATGATATTGGTAGTCACCCGAATGGGGAAAACTCGATTTGATTGAGTTTAAGGGTAGAGATGGGTTCTGCCCAATATTTTTTTATA AATGACCAACCAGATTATTTTATGATTGAGTAATGATATTCTTTCTATCAAAAC
• Tissue: pods
• Gene name: LI_gene_150745;
• Additional information: details;

Expression of Ll_transcript_385656

FPKM

• PAB: 0.8
• PNAB: 0.3
• PS1: 0.7
• PS2: 0.4
• PS3: 0.6
• PW1: 0.4
• PW2: 0.5
• PW3: 0.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_385656

• Blastp: Protein SIP5 from Eremothecium with 34.51% of identity
• Blastx: Protein SIP5 from Meyerozyma with 43.59% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (AGOS_ADR255W)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430026.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;