| Id Trinity | TRINITY_DN47208_c1_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_385626 |
| Sequence | CAATAATTTCTCTTCTCTTTTCTTCATCAACCATTTCAGGAATTGAACACTTGATGTTTTAGTCATCCTGGGGATCAAGTAGGTCTTACGCAACTAGACG AACGCCAATTTGAACTCTGATGAGTTGCAATTAGGTTTTTGTGTGTGTGTTTTTAATCGATTAAATGTTAATGATTGTCAATTCAAATTGGGTTGGAATT AGGATTTTACTGTCTGGTATCCAATTGTTAAGTGGTTTAAGATTTTTACCATTCGTATATTGAAATTTCATGTTTTTGTTGGTCTGAATTTATGATTTGT TTGGTGTTGTGGATGCAATGTGTTTTTGGGGATGAATTGTGTATGATTGAGAGAAAGTTTGAGTTTTTTGAGTGGTTCTGTTGAAAATTGTGGATTTGAG TTTTATCCTTTCTCCTCATTTTTTTTTGTTTTTTTGTTTTTACTTTTTGTGTTTTTGCATTTGTGTTTGAATTGATCATAAAACTCTGCAGGGATTTTGA TACACGTATAGCAGATAGGGTGTTGTTTTCTTTGGGTCTGTTGATTGTACTGTATATATGGTATTAGGCTGAATTTATGATTTGTTTTCCATGAAGTACC AATACTATAATATGGTTGCCGTAACGGTATATAATAACTCTTTAATAAGATGCTTCAGTATTTTTAGATACTTTTGGTGTACATGTCTTTTAATTATTTT ATGAATTTTTTCGCATCGATATATCCAGTATGTGTTTCCCAGATATTTTTTGCTTTTTTTTGTTTAGTGCTGTGGAAGCAATGGATTTTGGTGAAGAATT ATGTGAAGTCAAGAGAAAGTTGGAGTTTTTGAGTGATTCTGTTGAAAATTGTGGCCTTAGGGGTTTTATTTCTTGTTCTCATGTGTACACATTTTGGTGT TATTGCTTATGTGTTTGAATTCTGCATAAACTTCTGCTGGACTTTCAGGATATGCATCTCAGTGTCTCCAACAATGCCAGTGAATTGAGCAGAAAGAGTG TTATTTTCTTTGGGTCTGTCGATTGTATTGTATATAGCGGATACTTTTCTGATGTGGAAAAGTGAGTAGTTTTTGTGAAGAATGATTGGTTTTTTTATCT GTTGTTGTATTGCTTTATTTTGTTGAAGAATTCAAAACATATTTGTCAAAACAAGAACTGTATTTTGTTGGATGGGTAATAAATTTGGGAAGAGGAGCCA TGTAATAGATGAAAAATATACGAGGCCACAAGGGCTGTATAGTCATAAAGATGTGGATCATAAAGCTGAGGAAGCTAATACTTGAATCAAAGCTTGCACC TTGTTTTCCTGGAGATGAAGAAAACACCCATGACCATGAAGAGTGCCCAATTTGCTTTCTGTATTATCCAAGTCTAAACCGATCAAGATGTTGCATGAAG AGCATTTGTACAGAGTGCTTTTTGCAGATGAAAGTTCCAAATTCAACTCGACCCACACAATGTCCCTTCTGCAAAACACTAAACTATGCTGTGGAGTATC GTGGTGTGAAAACGAAAGAAGAAAAGGGATTGGAGCAGATAGAAGAGCAACGTGTTATAGAAGCAAAAATTAGGATGCGGCAGCAGGAACTTCTTGATGA AGAGGAAAGAATGAATAGAAGACAAGAAGTGAGTTCTAGAAATATGAATGTGGAAGTTGCAGATGTTGAATACAGCTCAAACGCAGTGGCTGCATCTTCA ATTTCTGTTGTTGAACATGAGGAAATAGTTTCTTCTCCAGATTCATGTACCACCTCAATGGTTAGACCACCTCCATCTGCTAGAACCAATAGAGATGATG AATTTGATGTCGATCTTGAGGACATTATGGTTATGGAAGCAATCTGGCTTTCTATTCAGGTGAAAATATCTGTCTGAATAATGTCATCTATAGCTATTGA ACATTAAAGTCATAATTAGAATGAAAGATCCCCTCTGTTGCAATAAGTGGTCTGCAACTTTTTTTGAAATTTTTAGCCATGTCATAGGTTTGTTATCCCG GGCCTAGTTCAATCTATAATGTGAAATTGCTTGTTTTCATTTTATTTTGCTCCAGTTTTGTAAGACAGTGATGAAAGTAAATAAATAGATTATTCTAAAG GAGTGCAAAATTTCTTTCACGAGAATGAAAAAAATGTATGATGTTTAGATTTGAGCTTGGTCCTCATCTTTTGAACGGTGATATAAATGTTAACTCCTAG ATAACAGCAAAAGAAAAGTCTTTGCGTTTAAACTTCGTTGTGTTTTAGGTAATAATCAAATTATTCAATATAACTCGTTAGTTTAAGCCTTGAAGTGAAG AGTGTTTAGAGGAAAAAAGTAGGGGAACTGTTCGAACTCACAAGAACTAAGAACAGCAGAAAAGAAAAAGAAAAAAAAAGTGGAGAATGATTCAAAAAGA GCAGCAGCAACATGGAACCACACCCATATGGAACGCTTTATCCTGCCACGAACACAGAAAGCATTGGCCTCCCTCAATTTGTAAGTTATAATGATTATAG GACACACCCATACATCTATTACCCTAGCCCAACTAGGTAACTCATGCTTAATCTGTCTAGGAAGAAAGAGAAAAAAAGTTACTCATGCATAAGTATTTGC CAGTTCGTACGCATCGAGTTTGAATACGAGGTAGCATCTTGTTAGGTTGAAATAACATTTCAAACCAAAGATCCGCCATTTATTATAGTATGATTTTGGG TAACCTTTAGATTTCTTGGTAAAAGAACCATACCGTGCAATCGAGTTCTTTCCTTTATTTTTCTTGGCTTGCATTGTCCTGTTTATTTCATGATTCTGAT TAAGTACATTACAGGAGAATGGTAGGCAAAGAAATTTATCATTTGCTGATGCTACTCCTGGACAATACATAGGCAATAATCGCAGTGTTTCATCTGTTGT GAGTCAAAAGACTGAATCATCCTCTTCTCCATCTGGGGGTCTTGCTTGTGCCATTGCAGCTCTTGCTGAGCGCCAGCAAACGGCTGGAGAATCATCTATG AGCTCCTCCAGTGAAAATACAACATCGTTAAACATGCTACAAGGTTCCAGAAGGTTTTATAACAGACTTCGTAGAGATATGGTTAGTTATCCGCCCATAG ACAACCTCAATGAGGTGCAACCAGATGATTCTGTTGCTATGGCAAGGGGTCATAGTGAATGGAGCATGGAGCATAGACCACAGGTGGATGAAACAGCAAC TAGTTATGAAAGCTCTGTCGTAGCTGCAGCAGATATTGTCGAACTATCTTCTTTACCACAGTCTAATGAAATTGATGGCAGCCTACAATGTGCCACAAAC CCCATTATTCCTGAAACTTTTGAGGAGCAGATGATGCTAGCTATGGCTGTTTCGTTAGCTGAAGCTCGAGCTATGTCAAGTGGACAGGGTGCTTCTTAGC CGTAGTTTTTCTTCGAGATGTCAAAGGAAAACCAGCTATCCTAGCCGGTAAAAGGTTGCTGCTTATGTCTTTTTTTATTCAAAAAAGAAGAAAGAAAACT GTGTTTGATCTTTGATATTCTCTCTATGTCATCTTATTAGTTTTTTGTACATAGAGTTATTTTTAAGTTTCAATAGTTGATGTAAAATCTCTTTTCATTG TTATGGTAATATGTGTCACACTTTAGGCATATTATTGAACAAGAAAAAGAATTTAAATTTTCTTGTCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_150745; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385626
| Blastp | Protein SIP5 from Eremothecium with 35.45% of identity |
|---|---|
| Blastx | Protein SIP5 from Meyerozyma with 43.59% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (AGOS_ADR255W) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430026.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |