Id Trinity | TRINITY_DN47208_c1_g4_i7 |
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Name Transcript | Ll_transcript_385647 |
Sequence | TGATTCTTTGCTGGTGGAGTACTCTACTCTCTCTTCCTTCCTTTCTTTTCTTCTCTTTTCTTTCTCTTCTTACATTCCATTTTCTCTCTCCTCCTCACTT TCTCTCTCTATAATATACAACTTTCTTTCCTTCCTCACTTCTCACGTAATAACAGCAACAACACTCACACCAAAACACAAGAGAGAAACTCTCTCTCTTC TTCTTCTTGTTCTTCTTTTCTCTCCCCCAAGATTTCAGGTTCTTTTCTTATTCTTCTTTCTTTCTTTCATTTCTTCCTTCTTATTTCGGCAATGTCTATG TTTGCATATTGGAGTGCTGAAACTTAGGGTTCTTGCCTATGTTTCCCTCGTTCATTCTGAATTGACATTGGTTGGAGTGAGTTCATTTCTGTCACATCAA ATTGCTGTGAATTCTGTAGTGTCTTGGTTTGAAATCATTGGAGGGATGATTCCTGATGAACAAGAGTGGGAAATTGGAGAGAGTATTTCAGTATTTGAAA GACTCTAGTGTCATTTAGGCTCTTAGGGTTTTACATGTTATTCTTATCTATTTGCATTCTTCATGAGATGCTTGCAGGGATGTAAGACATGTGTTTCTTC AACAATCTCAATGAACTGAATTGAAAAGACCCTTTATTTCTCTGTTTAATTTATAATTATACATCTGGGCTTAGACGATTCAATTGTTTTCTGTTGAGCA TGTAATTCATACAATCTAATTCAAAAGTCATTTGTTACATTCATTGTTGCTGTGTTGTTTTATCTTGCTGAATGTTTCCAAAAATAATCAGTGGAGATCA AGAACTGAATATTTTGGATGGGTAACAAACTCGGGAGGAGGAGGCAAGTGGTAGATGAGAAATATACAAGGCCACAAGGGCTGTATAATCATAAAGATGT GGATCATAAGAAGCTGAGAAAGCTAATATGTGAATCAAAGCTTGCACCATGCTACCCTGGAGATGATGATTGCACCTATGATCTTGAAGAGTGCCCAATT TGCTTTCTGTATTATCCAAGTCTAAACCGATCAAGATGTTGCATGAAGAGCATTTGTACAGAGTGCTTTTTGAAGATGAAAGTTCCAAATTCCACTCGGC CTTCCCAATGCCCCTTCTGCAAAACGCCAAATTACGCTGTGGAGTATCGTGGTGTGAAGTCGAAAGAAGAGAAAGGACTTGAGCAGATTGAAGAACAGCG AGTTATAGAAGCAAAAATTAGGATGAGACAACAGCAACTCCTTGATGAAGAGGAAAGAATGCATAAAAGACAAGAAATAAGCTTTTCAGACGGGAATGTA ACATTTACAGATGTTGAATACAGCTCAAATGCAGTGGCTGCGGCTTCAGTTTCTGTTGTTGAAGGAGAAGAAATTGTTTCTTCTCAAGACTCGTCTGCAA CCTCAATGGTTAGACCACCTCCATCGACTAGGTCCAACAGAGATGATGATTTTGACATTGATCTTGAGGACATTATGGTCATGGAAGCAATATGGCTTTC CATTCAGGAGACTGGGAAGCAGAGTTATTTATCTAATGCTGATTCTGCTTCCAGACAATATGTAGTTGACGATCCCTCTGTTATATCTGCTATGGGTCAA CTGACAGGATCATCCTCGTCTCCATCTGCAGGCCTTGCTTGTGCCGTTGCTGCTCTTGCTGAGCGTCAGCAAACTACGGGAGAATCAACTATGAACTCAG CCATTGGAAATTCATTTAACACACGGCAAGGTTCCAACAGTTTTTATAACAGGCTTGGTGGAGATCTGGGTAGCTATCCATCTATAGACAACATCAATGA GGTGCTCCCAGGTGATACTGTATCATTGACTAGGGTTAATGATGAATGGGACATGGACAATGAGCAAGAAGTGGCTGAAGCGTCGGTAACCCACTATGCA AGCTCTGTTGCAACAGAGGATGGTGACAGACTATCTTTACCACAGCCTGATGACATTGATTGCACCCTTCAAAGTGCTACAGTCCCCATTCTTCCAGAGA GCTTTGAAGAGCAAATGATGTTAGCTATGGCTGTTTCATTAGCGGAGGCTCGAGCCATGTCAAATGGACAGAGTGCTTCTTGGCAGTAGATTTTGGTTGA GGTACCGGTATAGTCCTTCTTAAACCGGCGATGCATGCCTCGACTGTTTAGCCAGCAGTCCTATTTAGAGTTTCAGCGAAATTCGCAATGTGTGCAATTT GTCCAAGGATCAGGGGTGATTCTATCCTCGCACATAATCTCTATATACAAATGTCAAAAGAAAACAAATGATTCAAGCTGGTAAAAGGTTTCTGCATAGT TCCTTTTCTTTGTTTAATGTCCTGCCCCTTAAGCGATGTTCTGTAAATAGTGTTTCAGACGTCCATCCTCTAATAGATGTCTTTTCATTCATATAGTAAA TAATTAATATATGGCAAATCGTGGACACATAATGAGCAAGGATAATTTAAATTGCCGTGATCTCTAGTCGTTGAAGTTGTTATTATTATACCTTAGAGTT TGGACTTTTGGAGCTTAAAATATTTGGGTAATTCACAAATGTATCATTGAAGTTATGAATAGTGACATTGTGGGCGTTTAAAATGTTTTCTTAACGAAGC CATTCCGAACTGGAAATTTGTCGTTTCTCACGCTCATTTGCAATGAAACAGTAGATTTTACTGATAAAATATTATTATGTAGTAGCTTTGTATTATTACA GATTAGTGGC BLAST |
Tissue | pods |
Gene name | LI_gene_150746; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_385647
Blastp | Protein SIP5 from Eremothecium with 40.43% of identity |
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Blastx | Protein SIP5 from Eremothecium with 40.43% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (AGOS_ADR255W) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449248.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |