Ll_transcript_384165

• Id Trinity: TRINITY_DN47222_c2_g1_i1
• Name Transcript: Ll_transcript_384165
• Sequence: TGAGAATCGCAGTCTCCATTTTTTGTTGGGCTTTTCATGTACCAGCCCTAAAACACCTATCCCATTCCAAAGCCCCAAAATCAAACCCAAGCCAGCCCAA CCACGAACTTCAGAACCAAAACCCTAATTTCACATCACTATATAAGAACCCTAATTTCACAACACCACCATTGTTCCCTAACATTGCCGTTTGACGATGC AGATCTTCGTGAAAACCCTAACGGGGAAAACCATCACCCTAGAAGTTGAATCCTCTGACACCATCGACAATGTCAAGGCCAAGATCCAAGACAAGGAAGG AATCCCACCGGACCAGCAGCGTCTGATCTTCGCTGGAAAACAGCTCGAAGACGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAATCCACCCTCCAC CTCGTCCTCCGCCTCCGCGGCGGTGCTAAGAAGCGCAAGAAAAAGACATACACCAAGCCTAAGAAGATCAAGCACAAGCATAAGAAGGTCAAGCTCGCTC TTCTTCAGTTTTATAAGGTTGATGATTCTGGAAAGGTTCAGAGGCTTAGGAAGGAGTGTCCTAATGCTGATTGTGGTGCTGGAACCTTCATGGCTAATCA TTTTGATAGGCATTATTGTGGTAAATGTGGTTTAACCTATGTTTACCAGAAAGCTTCAGCTGAATGATTTCATCGGTATTCGGTTTTGAATTTTGATCCT CGAATTTATGTTATGTTGAATCATTTATTATTTATAATGTTTTATATTTTATCTTGTAGAATTTTGGATTTTAGATATTTAAATTAATGGTCCATTGAAT TTCTAGTTTTTATTCAGGTTTTTCTGTGCGTGTTAATTTTTTTATGCTGGTATAAGTGCTTTGCCTTTAGTAAGTTCAAGCTTATGAGAATGATGCAGCC ATGCAGGTGTGATTACAGTACAGAGTGTAAAGAGTAAGACATTTTGATTCCACCCGAGAGCGGTATAGAAGGTCTAGTTCTATCATGTTTTGCAGGTGCA GTGTTTGGATGATTGCAACGTTCACAATTTCCCCTGACTTACAAGTTGATTTATTGTCTGTTTGGTTGGGCTGGTGGTGCATTTCAGTTTAAAAAGCTGT ACCATCATTGCCTTGTTAAACTTTTCAGCGGAGCCACGCAACTTGATTGAACTTCTGGTATGGAACCTTTGTTTAAGAACTACCAACATCCAATTTTAGA TATCAGCTGCATTCAAATAAACAATACCAGTGATAATTAGATGAAACTAGTGTTGCATGCACTTGTATTTTTAACTGGTTATAACTTCTGATGTCGCAGA GAACATGATTTTCATAAGCAACTTAGATGCTACAATTCCAAAGATTTGTTATTGTCGTGCTTGTCTTAACTAAACTAAAAGTCTATCTACAAATTAATGC CATGTATCTGGGTGTTCCTACTTCCTACAAGTGTTGTCCCCAACTTCAATTACCCGTAAAGTCGAAGCGCTATTATAAATTTTTGCAAATATATTTTTTA TAATTTATTGTTCTTTAAAAAAATTGGGTTTTTTTATCATCACCATCCAATTTTTGTGTATTGCATAGATCTAGATTAATGGAGTTCCTTCAAAAGTCGT GGATGTTGTAATGTTGTTATCGATATGGAATCCTTGTATGCAATGACACTGTTGCATGAAGATGAAGCTCAACGATCCACACT
• Tissue: pods
• Gene name: LI_gene_150827;
• Additional information: details;

Expression of Ll_transcript_384165

FPKM

• PAB: 1.1
• PNAB: 5.7
• PS1: 2.5
• PS2: 3.3
• PS3: 3
• PW1: 3.3
• PW2: 2.7
• PW3: 2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_384165

• Blastp: Ubiquitin-40S ribosomal protein S27a-1 from Arabidopsis with 91.03% of identity
• Blastx: Ubiquitin-40S ribosomal protein S27a from Lupinus with 96.77% of identity
• Eggnog: 30S ribosomal protein S27Ae(COG1998)
• Kegg: Link to kegg annotations (AT1G23410)
• CantataDB: Link to cantataDB annotations (CNT0000474)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019428995.1)
• Pfam: Ubiquitin-2 like Rad60 SUMO-like (PF11976.7)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;